Eleginops maclovinus (Patagonian blennie): 134870009
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Entry
134870009 CDS
T09869
Symbol
usp13
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
emac01002
]
134870009 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134870009 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134870009 (usp13)
Enzymes [BR:
emac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134870009 (usp13)
Peptidases and inhibitors [BR:
emac01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134870009 (usp13)
Ubiquitin system [BR:
emac04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134870009 (usp13)
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134870009 (usp13)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
134870009
NCBI-ProteinID:
XP_063748075
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All DBs
Position
9:18924220..18954468
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AA seq
859 aa
AA seq
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MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKNTGAAGGAIPRRKNGKVFLDLELNRDFNGEDFEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NAVRIPPSGWKCQKCEMRENLWLNLTDGTVLCGKWFFDGSGGNGHALEHYKETKYPLAVK
MDTITPDGADVYSFEEEEAVLDPHISDHLSHFGIDMLQMQKKTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKHQQKGVSPRMLKSLVSRAH
PEFSSSRQQDAQEFLMHVINIVERNSAGSENPSDAFRFLVEERLQCCQSRRVRYSQRVDY
CIQLPAPFEAATNREELLAYEAKRREAEENMRAPPEPVRARIPFTACLQAFTEPDNVPDF
WSSALQAKSAGVKTSRFASFPEYLILQIKKFTFGVDWVPKKLDLAIDVPDFLDLSRMRAT
GLQAGEEELPDLLPPIVLPEDTRDNSMGSADSPEIDEAAAMQLAEMGFPVEACRKAVYYT
GNMGPEMAFNWIIAHMEEPDFAEPLTLPSMIDLGPSISDSPMGATPLGNSPPEESIAILT
SMGFPRTHSIQALKATNNNLERALDWIFTHPEEEESDVLSDMADTEPNDNAFSNANSHSN
STMSPDRDAAGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHKVCLS
ERPPKDLGYIYFYHRLSIS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatatatgcccaccatcagagtgcccagg
accggggatagggttttcaagagcgagtgcgccttctccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctcggcttcggacgagaacatgttgagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacgacacgtcaaagagaaa
aatacaggagctgcaggaggcgccatccccagacgaaagaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaagactttgaatatgaagacgaggccaagctt
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtcaccatcgcctgtgacgcagtgctcaatgcaccttcagcttacaagaagcaggagcct
gaatcctgggaggaggagatccaggtgtccagacatgccaggagcctcagacagctggat
aatgcggtcaggatcccacccagtggctggaagtgtcagaagtgtgagatgagggaaaac
ctgtggctgaacctgacagacggaacagtgctctgtgggaagtggttctttgatgggagc
gggggaaatggccatgctcttgagcactacaaagagaccaaatacccgctagctgtcaaa
atggacaccatcacaccagatggagcagatgtgtactcatttgaggaggaggaagcagtt
ttggacccccacatatcagaccacttgtcacactttggaatagacatgctacagatgcag
aaaaaaacagagaacggtcaccacacagacaataactcccggccgcgggtcagtgagtgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtttgggtctggctacacgggc
atcaaaaacctgggcaacagctgctacctgggcacggtgatgcaggtcctgttcagcatc
ccagacttccagaggatgtatgtgggtaatctccagaggatatttgactattcacccctt
gaccccagccaggactttgctacacaaatggctaaactgggacatggactgctctcaggc
caatactccaaaccacccatgaaatccgagctcattgaacaggtgatgaaagaagaatac
aagcaccagcagaagggcgtctccccccgaatgttgaagtctctggtcagcagggcacac
ccagagttttcctcttcgagacaacaagatgcccaggagttcctcatgcacgtcatcaat
attgtggagaggaacagtgcaggctcagagaatccgagcgacgccttccgcttcctggtg
gaggagcgacttcagtgctgccagtctcgtcgggtccgttactctcagcgggtcgactac
tgcatccagctgccagctccctttgaggcggccaccaatcgagaggagctgctggcgtac
gaggccaagcgaagggaagccgaggagaacatgcgggctcctcctgagccggttcgagcc
cggatccccttcaccgcctgcctgcaggccttcacagagccggacaatgtccccgacttc
tggagctcagcgctgcaagccaagtcagccggagtcaaaacttcccgtttcgcctccttc
ccagagtatctgattctgcagattaagaaatttacatttggggttgactgggtgccaaag
aaactagatttggccattgatgtcccagactttctggatttgagtcggatgcgggccaca
gggctgcaggccggtgaagaggagctgcctgacctcctgcctcccatcgtgctacctgaa
gacaccagagataactccatgggctctgcagactctccagaaatagatgaggcggcagca
atgcagctggcagagatgggcttcccggtggaggcgtgtaggaaggcggtctactacacg
ggcaatatgggtcccgagatggccttcaactggatcatagcccacatggaggagcccgac
tttgcagaacctctcacactgccctccatgatagatctcggtccctccatcagcgacagc
cccatgggcgccaccccgctgggaaactcgccccctgaggagagcatcgccatcctcact
tcgatgggcttcccgcgcactcacagcatccaggcactcaaagccacgaataataacctc
gagcgagcactcgactggatcttcacccaccctgaggaggaggagagtgatgtcctttca
gacatggccgacacggagcccaacgacaacgccttctccaacgccaactcacacagcaac
tccacgatgtccccagacagagacgcagcaggcccacgggtcaaagacggaccgggacgt
tatgagctcttcgctttcatcagtcacatgggagcatccacaatgtctggacattatgtt
tgtcacatcaagaaggaaggaaggtgggtgatctacaacgaccacaaagtgtgtttgtca
gaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtcaatcagttaa
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