Eublepharis macularius (Leopard gecko): 129323671
Help
Entry
129323671 CDS
T09084
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129323671 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129323671 (PRPF40A)
Spliceosome [BR:
emc03041
]
Complex A
U1 snRNP components
U1 related factors
129323671 (PRPF40A)
Complex B
129323671 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
129323671
NCBI-ProteinID:
XP_054826216
UniProt:
A0AA97KPS2
LinkDB
All DBs
Position
2:complement(186884153..186919717)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSGGDSAAAAASPQPLPFSLPKPPPLMQLNPGEGVRPVGAPGAEQSPKSSRLGGRPDWPA
GKPVSLLAPLLPPRGEPEPLLPFGPSSRQPLRGRLLGRCSGGAGGGGGGGGSLLNPAMRP
GGGGGGGGGGMGRESLMMGHPGMPHYPPMGMHPMGQRPPNMPPVSHGMMPQMMPPMGGPQ
MGQMPGMMQSVMPGMMAPHMSHAPMQPTGPPGVNSMDSQIGLAPPGTQPTPPVVCSLPQA
ATTNNSANEEPSKQKSVWSEHKSPDGRTYFYNTETKQSTWEKPDDLKTPAEQMLSKCPWK
EYKSDSGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSGKAEELLQSSSAVVAAGIPI
AAPTIVETPVAVPAAPAAPAVSAPEAEPSAVATVVENENTVSAVADEQVQPAAPIVQEQT
AEVVTNSIEETPKQESSDVVPKKDEEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNA
SWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARLKYKEAKESFQRFLEN
HEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEA
LKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEE
EEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP
GSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVTVISSTKRATTLD
AGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIEMDAVWEDIRER
FVKEPAFEDITLESERKRIFKDFIYLLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSE
SEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVDRE
KDKKERENEKERSRQRSESKHKSPSKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLD
EDQ
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggggactcggcggccgccgcggcctcccctcagccgttgcccttctccctg
cccaagccccctcccctcatgcagctcaatcccggcgaaggcgtgcggcccgtaggggcc
cccggcgccgagcagtcgcccaagagttcccgcctgggagggcgccctgactggccggcc
gggaagcccgtcagcttgctggcccccctgctccctccccgaggggagcccgagccgctc
ttgcccttcgggccctcctcccgccagccgctccgggggaggctgctgggcagatgcagc
ggaggagcgggcggcggtggaggaggcggcgggagcctcctcaaccctgcgatgcggccg
gggggcggcggaggcggcggaggaggaggaatgggccgggagtccctcatgatgggacat
cctggcatgcctcactatccacccatggggatgcatcctatgggtcagaggccgcctaac
atgcctcctgtatcgcatggaatgatgcctcaaatgatgcctccaatgggaggaccacaa
atgggacagatgcctggaatgatgcaatctgtgatgcccgggatgatggcgccccatatg
tctcatgctcccatgcagcctacaggaccgccaggggtgaacagcatggattctcaaatt
ggtttagcacctcctggaactcagccaacacccccagtagtttgttcccttccacaagct
gccacaactaacaattctgctaacgaagagccttctaaacagaaatcagtatggtcggag
cataaatcaccagatggaagaacatacttctataatactgagaccaaacaatctacatgg
gaaaagccagatgatcttaaaacacctgctgagcaaatgttatcaaaatgtccatggaag
gaatataaatctgattctggaaaaccttactattacaattctcaaacaaaagagtcacgc
tgggcaaaacccaaagaacttgaagatcttgaagcaatgattaaagcagaagaaaacagt
ggtaaagcagaggagttgcttcagtcatcatctgcagtggttgcagcagggattccaatt
gctgcacctactattgtggaaactcctgtggctgtgccggcagccccagctgcacctgct
gtgtcagcccctgaagcagagccctctgctgttgctactgttgttgaaaatgaaaataca
gtcagtgctgtagctgatgagcaggtgcagcctgctgcacctattgtgcaggaacagact
gcagaagttgtcactaactccatagaagaaactcctaaacaggaatcctcagatgttgtt
cccaaaaaagatgaggaggatgcccaaccagtaaagaaaacctatacatggaatacaaaa
gaagaagctaagcaagcatttaaagagctattgaaagaaaagcgtgtaccatccaatgcc
tcttgggagcaagctatgaaaatgatcataaatgatccaagatacagcgctttggcaaag
ctaagtgagaaaaaacaagcatttaatgcctacaaagtccagacagagaaagaagaaaaa
gaagaagcaagattaaaatacaaagaagccaaagaatctttccagcgttttcttgaaaac
catgaaaagatgacttccacaaccagatacaaaaaagctgaacaaatgtttggagaaatg
gaggtctggaatgcaatatccgaacgtgatcgtcttgaaatctatgaagatgtcctgttc
tttctgtcaaaaaaagaaaaagagcaagccaagcagttaaggaagcggaactgggaagca
ttaaaaaacatcctggacaacatggctaacgttacttactgtactacgtggtcagaagct
cagcagtatctgatggacaatcctacatttgcagaggacgaggaacttcagaatatggat
aaagaggatgcattgatttgctttgaagagcacataagggctttagaaaaggaagaggag
gaagaaaaacagaagagcttactcagggaaaggcgacggcaacgtaaaaatagagaatct
ttccagatatttctggatgagctacatgaacacggccagttgcattcaatgtcgtcttgg
atggagttgtatcctacaataagttctgatatcagatttacgaacatgcttggtcagcct
ggctcaacagcacttgatcttttcaagttttatgtcgaagatttgaaagcacgctaccat
gatgagaagaagataataaaagacatcttaaaggataaaggatttgtagttgaagtgaat
accacttttgaagactttgtcacagtcatcagttcaactaaaagagctaccacattagat
gctggaaatattaaactggctttcaatagtctgttggaaaaggcagaagcccgtgagcgt
gagagagagaaagaagaagctcgcaaaatgaaacggaaagagtctgcttttaagagcatg
ctaaaacaagccactccccccattgaaatggatgcggtgtgggaagatattcgagaacga
tttgtgaaagaaccagcatttgaagacatcactctagaatcagaaagaaaaagaatattt
aaagatttcatttatttactagagcatgaatgccagcatcaccattcaaagaacaagaag
cattctaaaaaatctaagaagcatcacagaaagaggtctcgctctcgttcgggttcagaa
tcagaggatgatgatagccattcaaagaaaaagaggcagcgctcagagtcacggtcagtt
tctgaacggtcttccagtgcagaatctgaaagaagctacaagaagtcaaagaaacacaaa
aagaagagcaaaaagaggaggcataagtcagattctccagagtcagatgttgatcgagaa
aaagataaaaaagaaagagagaatgaaaaggaaagaagtaggcaaagatctgaatctaag
cataaatcaccttccaaaaagcgtcctggtaaagattctggtaattgggatacctctggt
agtgaattaagtgaaggtgaactagaaaaacaaaggaggaccctcttggagcaactggat
gaagatcaataa
DBGET
integrated database retrieval system
