Candidatus Johnevansia muelleri: CEM_121
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Entry
CEM_121 CDS
T03696
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
eme
Candidatus Johnevansia muelleri
Pathway
eme03030
DNA replication
eme03430
Mismatch repair
eme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEM_121 (ssb)
03430 Mismatch repair
CEM_121 (ssb)
03440 Homologous recombination
CEM_121 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eme03032
]
CEM_121 (ssb)
03400 DNA repair and recombination proteins [BR:
eme03400
]
CEM_121 (ssb)
03029 Mitochondrial biogenesis [BR:
eme03029
]
CEM_121 (ssb)
DNA replication proteins [BR:
eme03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CEM_121 (ssb)
DNA repair and recombination proteins [BR:
eme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CEM_121 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
CEM_121 (ssb)
Mitochondrial biogenesis [BR:
eme03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CEM_121 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Glyco_hydro_88
GATase1_like
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CDZ16389
UniProt:
A0A078KHX1
LinkDB
All DBs
Position
I:111597..112040
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AA seq
147 aa
AA seq
DB search
MVIGINKVILIGYIGNDPKIRYLPSGNTVCNISIATKNRWKTPNGQRQERTDWHSVVIFN
KLSEIVQQYVKKGSLLYIEGYLKTKKWQSSDGKNRYSTDIIANEIQILIFKETNTPEPTP
VKINNNEKYKLNNINTNYDDFDDEITF
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggttataggaattaacaaggttattttaataggatatattggtaatgacccaaaaata
cgttatcttccatctggaaatactgtatgcaatattagtattgcaacaaaaaatcgatgg
aagaccccaaatggacaacgtcaagaacgtactgattggcattctgtagttatattcaat
aagttatccgaaattgtacagcagtacgttaaaaaaggatcactcctttatatagaaggt
tatcttaaaactaaaaaatggcaatcttcagatggtaaaaatcgttactctacagatata
atagcaaatgaaattcaaattttaatttttaaggagactaatacgccagagccgactcca
gttaaaataaataataatgaaaaatataaattaaataatattaataccaattatgatgat
ttcgacgatgaaattacattttaa
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