Emticicia sp. 21SJ11W-3: MB380_21470
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Entry
MB380_21470 CDS
T09449
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz02024
Quorum sensing
emz03060
Protein export
emz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MB380_21470 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MB380_21470 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MB380_21470 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
emz02044
]
MB380_21470 (secDF)
Secretion system [BR:
emz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MB380_21470 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
ACR_tran
MMPL
Nup188_N
Motif
Other DBs
NCBI-ProteinID:
UTA68140
LinkDB
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Position
complement(5076890..5079877)
Genome browser
AA seq
995 aa
AA seq
DB search
MNNKGGIIALLVAFLSISAYFLLRTWKANDIRKDAEAFATDKSGKIDYAKKQRYLDSLWK
KPVFLGTTTEDLTKQELGLGLDLQGGMSVILEVSPAEILRSLAASARDPKVATAIENAQK
RAVSTSTNFVDLFAQEYKKLAPDTKLASVFSNSSNRGTLSLESSDSQVVNYIKKEVDGAF
DRAFRIIQTRVDKFGVANPNLQRLSGTNRIQVELPGVDNPDRVRKLLSGAAKLEFCEVYT
MQEIAPAIDGLAGILLQMDIEARKKAPAAAETTTASTPKDSSKNSLSAQLAGGAKGDSTK
GDSTALAQRQNNAFSNLFIPTGYGLAVRTKDIARVKEVMDRSDVRALFPANASYVFDIKP
RANGTNTSEEIVDMYFVKDLGKAPLEGDVVTNASQDYDERGKPAVEMQMNAEGARKWKAL
TGANIGRPIAIILDNYVYSAPNVNGEIGGGRSSIAGNFTVEEAQDLANVLKAGKLPAPTN
IISEDIVGATVGSEAAQAGIISSLVGLLIVLGFVLIYYNKAGVIADIALIVNLFLLLGVM
ASFGATLTLPGIAGMVLSVGVSVDANVLIYERIKEELALGKTFKDAVRDGFKNAMSSIID
SNVTTLITGVVLFVFGSGLILGFATTLLIGIFTSLFSAIFVSRLLFEYYISKGKSVSFVT
KWSEKLFKDSKFDFVSKRKLYYTISSAIIIAGIISIAIKGFGLGVDFLGGRTYIAKFSQT
VNTEDIEKALKPTFEGQAIEVKTFGGFDQVKITTPYKIENTNTEVEKDIQASVNKVLANV
NGNSGKVVSSSKVGPTIANDAIWGAIKAVLISIILVFAYIYIRFRKLAFGYGSLVALLHD
VLIILGVFSILRGFLPFSLDVDQAFVGAVLTIMGYSMNDTVVVFDRVREYLSEKRDVKED
IPTVINNALNSTLSRTAVTGFSTLLVLLVLLIFGGETIRGFVFAMFIGVIVGTYSSLFVA
TPIVVDGMQRDMRKEAEKLAAATPVAAESKKSKKA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaaggtggaattatagcgcttttggttgccttcctgtcaatcagtgcttac
tttttattgcgtacctggaaagccaacgacatcagaaaagatgcagaggcttttgctacc
gacaaatcaggaaaaattgattacgccaaaaaacaaagatatctggactcgctgtggaaa
aaaccagtgtttttaggtacaacaactgaagaccttaccaaacaggaattaggccttggc
cttgaccttcaaggaggtatgagtgtaattcttgaggtttctcctgccgaaatccttcgt
tcgcttgcagccagcgcaagagaccctaaagtagcgaccgctattgaaaacgctcagaaa
agagccgtttctaccagcacaaactttgtagacctgtttgcacaggagtacaaaaagctg
gcaccagacacaaaactggcttcggttttttctaatagctcaaaccgcggtacacttagc
cttgagtcgtcagacagccaggttgtaaactacattaaaaaagaagtagatggcgctttt
gaccgtgccttcagaattatccagacccgtgttgataaattcggtgtggcaaaccctaac
cttcaacgtttgtctggtactaaccgcattcaggtagagttaccgggtgttgataaccct
gaccgcgtgcgcaagttgttatctggtgcagcaaaacttgaattctgcgaagtgtataca
atgcaggaaattgccccggcaattgatggtcttgcaggtattttattgcagatggatatt
gaggcaagaaagaaagctccggcagcagctgaaaccactactgccagcacgccaaaagac
agctctaaaaacagcctgagtgcccagttggccggtggtgccaagggtgattcaactaaa
ggagactcaactgctttggctcaacgccagaacaatgctttcagcaaccttttcatacca
acaggctatggtctggctgttagaaccaaagacattgcccgcgtaaaagaagtaatggat
cgttcagatgtgcgtgctttgttcccggcaaacgccagctacgtatttgatatcaagcct
cgtgcgaacggtaccaacaccagcgaagaaattgtggatatgtattttgtgaaagacctg
ggcaaggcgcctttggaaggtgacgtagtaaccaacgccagccaggattacgatgaacgc
ggaaaacctgccgttgaaatgcagatgaatgcagaaggcgccagaaaatggaaagcctta
acaggtgcaaacattggccgcccgatagctattattcttgataactatgtgtattctgcg
ccaaacgtaaacggcgaaattggcggaggccgctcaagtattgccggtaactttactgta
gaagaagcacaagacttagccaatgtgttgaaagccggtaaattgccagcaccaaccaac
atcatctctgaagacatcgtaggtgctacggtaggttcagaggctgctcaggcgggtatt
atctcttcattagttggtttgttgatagttttgggctttgtgttaatttactacaacaaa
gccggtgtcattgccgatattgcccttattgtaaacttgttcctgctgctaggtgtaatg
gcctcttttggcgctacacttaccttgccgggtattgctggtatggtattgtcagtaggg
gtgtctgtcgatgctaacgtacttatctacgagcgtatcaaagaagagttggcgctgggt
aaaacctttaaagatgccgtaagagatggtttcaaaaatgcaatgtcgtcaatcattgac
tccaacgtaaccacgcttatcactggggttgtactttttgtttttggttccggccttatt
cttggttttgctactacgttgttgattggtatcttcacgtcattgttctcagctattttt
gtttcaagattactctttgaatactacattagtaaaggtaaatcggtttcgtttgttact
aagtggtcagagaaactatttaaagattcgaaattcgattttgtatccaaacgcaagttg
tattacactatttcaagtgccattattattgcaggtattatttcaattgcaattaaagga
tttggtcttggtgtagacttcctgggtggccgtacttacattgccaagttcagccagact
gttaataccgaggatattgagaaagcgctgaaacctacatttgagggccaggccattgag
gttaaaactttcggaggtttcgaccaggtgaaaatcaccaccccttataaaattgaaaac
accaatacagaagttgaaaaagacattcaggctagcgtaaacaaagttctggcaaatgta
aatggcaactccggaaaagtagtgagctcttcaaaagtagggccaaccattgcgaatgat
gccatctggggtgcaataaaagccgttttaatttcaatcatattggtattcgcctatatt
tatatccggttccgtaagctggcttttggttacggctcattggtggcattgttgcacgac
gtcctgattatccttggggtattctctattcttcgtggtttcttgccattctcgcttgat
gttgaccaggcttttgtaggtgctgtgctaaccattatgggttactcaatgaacgacacc
gtggtcgtatttgaccgtgtgcgtgagtacttatccgaaaaacgcgatgtgaaagaagat
attcctaccgttatcaacaatgccttgaacagtactttgagtagaacagccgtaacaggg
ttctctaccttgcttgtactattggtattattgatttttggtggtgaaaccatccgtggc
ttcgtattcgctatgtttatcggggtaatcgtgggtacttactcttcgttgtttgttgca
acgcctatcgttgttgacggtatgcaacgcgacatgcgcaaggaagctgagaaactggcc
gcagcaacacctgtagccgcagaaagcaaaaaatctaaaaaagcataa
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