Enterococcus faecalis 7L76: ENT_05950
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Entry
ENT_05950 CDS
T02585
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ene
Enterococcus faecalis 7L76
Pathway
ene03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ene00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ENT_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ene03021
]
ENT_05950
03019 Messenger RNA biogenesis [BR:
ene03019
]
ENT_05950
Transcription machinery [BR:
ene03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ENT_05950
Messenger RNA biogenesis [BR:
ene03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ENT_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBL31376
LinkDB
All DBs
Position
571187..572461
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AA seq
424 aa
AA seq
DB search
MAELENSTLKDIYAYAKEFKIPYYSQMNKKELSLAVIRAQAEKQGFFFMEGILDIVSQDG
YGFLRPINYGPSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVESVNGKD
PEEAKERPHFPALTPLYPEKQLTLETTAGRLSTRMIDVFAPIGFGQRGLIVAPPKAGKTS
VLKEIANGITENHPDVELILLLIDERPEEVTDLERSVKGDVVSSTFDQQPQNHTRVAELV
LDRAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFFKPKRFFGAARN
IEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLSRELAERRIFPAIDIKKSSTR
KEELLMTPEQLEETWKLRNNMSGDSLEYTDQFIKMLKRTQNNQQLFEVFHDVSFGKQIKR
NPKR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattggaaaacagtacgttaaaagatatttatgcgtacgcgaaagagtttaaa
attccttattatagccaaatgaacaaaaaagaattgtctttagctgtgattcgtgcacaa
gctgagaagcaagggtttttcttcatggaaggaattttagatattgtttctcaggatggt
tatggctttttgcggccaattaattatggaccaagtgcagaagacatttatatttcttct
tctcaaattcgtcgtttcggattgagaaatggggacaaagtagctggcaaggcgcgtccg
ccaaaggaatcagaacgttactatggactcatgcatgttgaaagtgtcaatgggaaagat
cctgaagaagcgaaagagcggccacattttccagcgctaacaccgttgtatcctgaaaaa
caattaacgttagaaacaacggctggcagattatcaacacgaatgattgatgtatttgcc
ccaattggttttgggcaacgtggtttaattgtagcgccgccaaaagcggggaaaacaagt
gttttaaaggaaattgctaatgggattacagaaaatcatcctgatgtggaattgattctg
ttgttaattgacgagcgtcctgaagaagtgactgatttagagcgaagcgttaaaggcgat
gtagtttcttcaacttttgatcaacaaccacaaaatcatacgcgagttgctgaattggtt
ctggatcgagcaatgcgcttagttgaagacaaacgggacgtagttattttaatggacagc
atcactcgtttagcaagggcctataatttagtggtcccgcctagtggtcgaaccttaagt
ggcggaatagatccagctgcgtttttcaaacctaaacgattttttggtgctgccagaaat
atcgaagaagggggcagtctgactattttagccacggcattggtggatacaggtagccga
atggatgatgtcatctatgaagaattcaaaggcacaggcaacatggagctccatttatct
cgtgaattagcagagcgccgtattttcccagcaattgatattaaaaaatcaagtacgcga
aaagaagagttgttaatgacaccagaacaactagaagaaacgtggaaattgagaaataat
atgtcaggagactcgctggaatatacggatcaattcataaaaatgttgaaacggacccaa
aataatcaacaattatttgaagttttccatgatgtttcgtttggcaaacaaattaaaaga
aatccaaaaagataa
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