Ensifer sp. PDNC004: JVX98_01225
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Entry
JVX98_01225 CDS
T09472
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
enp
Ensifer sp. PDNC004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
DUF5959
Motif
Other DBs
NCBI-ProteinID:
QRY65749
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Position
unnamed_1:complement(266118..268589)
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AA seq
823 aa
AA seq
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MATSKLTTYRAKRDFSRTPEPAGRAGGHGNRFVVHKHHATADHYDLRLQVGDVLKSWAVP
RGPSLNPADKRLAVETEDHPLDYIDFEGVIPEGEYGGGPMIVWDTGVWAPMDDIEKSLRT
GAFKFRLAGEKLNGGWMLTRLKPKTDDDDKRNWLLFKEHDPAADPDVDILTARPESVKSG
RRIEELVEPPKKPTKAAKPAVLKPGSLTGAVKGPKPQRIEPQLASPTPKPPGGPPEKQTW
LHEIKLDGYRTMADISDGSVRLITRSGLDWTKRYGDLPDAFGKLPCREAMIDGEIVALDD
KGISRFSLLQEALSSGTDGKLVFYAFDILHLDGWNVAEAPLEKRKALLAQLLQGQISSRS
AIQFSDHVKGDGRGLYDQAAELGLEGIVSKRASSPYRSGRTQTWTKTKALKSEDFVIAGY
TVSEAAEGLAALALGEWENGELHYRGKVGTGFDAATAKQLLARLEALRGGETALDGAPKE
ILWVRPVLSARIHYSNRTTDNVLRHAVFKGLRDVALSAPATAPRKRLITDADLATIQVTN
ADRRVFGRSGPTKLDIAVYYALVGDFMLPHILGRPVSLFRCPTGKQADCFFQRHPFTGMP
PSIVSFNAANSEGESKSFLSIEGTKGYLALAQFGVIELHSWGSRRARLEKPDRVVFDLDP
GEGVLWRDVVEAAVHIRGELEALGLVPFVKTSGGSGIHVVVPVKPKLDWKKTHQATSAIA
TRLAATAPQTFTTTMGKENRVRRIFIDFHRNARSHTAAAPYSLRARTNLPASAPLQWADL
ETIDAPEDLNYSSLPGLLDTFGDPWADIDDFAKELPLLSETRT
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgaaactcacgacctatcgtgcgaagcgggacttttcccggacgccggag
cctgccggaagagccggcgggcacggcaatcgtttcgttgtgcacaagcaccacgccacc
gccgatcactatgatctgagattgcaggtgggcgacgtgctcaaaagctgggcggtcccc
agaggcccctcgctcaaccccgccgacaagcggttggccgtcgagaccgaagatcatccg
ctcgactacatcgacttcgagggcgtgatcccggaaggcgagtatggcggcgggccgatg
atcgtttgggacaccggcgtctgggcgccgatggacgatatcgagaaaagcctgagaacg
ggcgcgttcaagtttcgtctcgccggcgagaagctcaatggcggctggatgctgacgcgg
ctgaagccgaaaacggacgacgacgacaagcgcaactggctgctgttcaaggagcatgat
cccgccgccgatcccgatgtcgacattctgacggcgcgtccggagagcgtgaaaagcggg
cggcggatcgaagagttggtcgagccgccgaagaaaccgacgaaagcggcaaagccggcc
gtcctcaagcccggttcgctgacgggcgccgttaaaggtccgaagccgcagcggatcgag
ccgcaactggccagcccgaccccgaagccacccggagggccaccggaaaaacaaacctgg
ttgcacgagatcaagctcgacggttatcgcacgatggcggatatctcggatggctcagtg
cggctgatcacacgtagcgggctcgactggacgaagcgctacggtgatcttccagacgca
ttcggcaagttgccctgtcgggaggcgatgatcgatggcgagatcgtcgctctcgacgac
aagggcatcagccgcttctcgctgttgcaggaggctctatcgtccgggacggatggcaag
ctcgtcttctatgccttcgacatcctccatctcgacggctggaacgttgccgaagctccg
ctggagaagcgcaaagctctgctggcgcaactgcttcaagggcagatatcgagccgctca
gccattcagttcagcgaccatgtgaagggcgatgggcgcgggctctacgatcaggcggcc
gagcttgggctggaagggatagtctcaaagcgcgcttcgtcgccctatcgtagcggacgc
actcagacctggaccaagacgaaagcgctcaaaagcgaagacttcgtgattgcgggttac
acagtctcggaggcggccgaaggccttgcggcactggcgcttggggaatgggagaacgga
gaactgcactaccgcggcaaggtcgggaccggcttcgatgcggcgacagccaagcagttg
ctcgcgcggttggaagccttgcgcggtggcgaaaccgcgctcgatggcgcgcccaaggaa
atcctctgggtgcggccggtgctatcggcccgcatccactactccaaccgcacgaccgac
aatgtgctgcgccacgcggtgttcaaggggcttcgcgatgtcgcgctttcggccccggcg
acggcgccgcgcaaacggctgatcaccgacgccgacctcgcgacgatccaggtgaccaat
gccgaccgccgggtcttcggaagatctggaccgaccaagctcgacattgccgtttactat
gcgctggtcggcgatttcatgctgccgcatatcctcggccgcccggtgtcgcttttccgc
tgcccgacgggaaagcaggccgattgcttcttccagcgccatcccttcaccggcatgccg
ccttcgatcgtcagcttcaacgcggccaattccgagggcgagagcaagtccttcctctcg
attgagggtacgaagggttatctggcgctcgcccagttcggggtgatcgagcttcacagc
tggggttcgcggcgcgcgcggctggagaagcccgatcgcgtcgtcttcgatctcgatccc
ggcgaaggggtcttgtggcgcgacgtggtcgaagcggccgttcacatacgcggcgagctc
gaagcactcggcctcgttcccttcgtcaagacgtcaggcggcagcggcatccatgtcgtg
gtgccggtcaaaccgaagctggactggaagaagacacaccaggccacgagcgcgattgcc
acccggttggcggcgaccgcgcctcagactttcaccacgaccatgggcaaggagaaccgt
gtcaggcggatcttcatcgacttccaccgcaacgcgcgcagccatacggcggccgctccc
tattcgctgcgcgcacgcaccaatctgccggcttcggccccgcttcagtgggcggatctg
gagactatcgacgctccggaggatttgaactattcttcgctgcctggacttctggatact
ttcggcgatccttgggcggatatcgacgactttgccaaggaactgccgcttctgtccgaa
acgaggacgtaa
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