Ensifer sp. PDNC004: JVX98_04090
Help
Entry
JVX98_04090 CDS
T09472
Name
(GenBank) putative Ig domain-containing protein
Organism
enp
Ensifer sp. PDNC004
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Cadherin-like
TIG
Y_Y_Y
Cadherin_5
fn3
Motif
Other DBs
NCBI-ProteinID:
QRY64854
LinkDB
All DBs
Position
unnamed_1:930052..935586
Genome browser
AA seq
1844 aa
AA seq
DB search
MASPWRMEVVCVTKSDPADALLSALVLSSGTLEPAFDTNNFSYTAKVASGVSTLAVTPSA
VGATATVTINGETATSGSPTNVALNVGSNTLKIAVATEDRSVKRTYWLVVTRAAPPTITG
LTPSTGSTAGGQSVTITGTNFIGVSAVTFGGTAATTFTVDSATQITAIAPARTAGPADVT
VTTVDNTSVTRANGYTYGSTPVVTAVKPVNTPARTYAIGASLMFDVDFDQTIAISNGFPH
LKAVLGAVERRMNLIGYGSSTMRFAYTVVENDLDEDGIAIGSMSLEGATIKDYYHVADAD
VTLRNIADMSGIRIDGVRPTVASIKPAGTGTIFDVEFSEPVMAVDIGKFTLVKTGTAQGT
IDSVSGSGSAYQVHVANVSGDGTLALSLSTGTGIKDIAGNEMASAFTGGTPMIVTPPSID
ASLSGIGMSNGTLTPAFDAATTSYSLSVANSVTSIAVTPASTHPGATVSVNGAVVSAPGS
VPVSLQVGDNAIRIVVTAQDAVTKKTYDIVVNRAGAVPDAPTDVSAVSGDGEATVSFTAP
VNAGTTPISSYTVTSDPGGAVATGGSSPITVKGLANGTAYTFTVTATNSIGPGPASDPSG
SVTPKPAPVANAVSATVAANSTANLMTLSLSGGAADTLAIGTQPTHGAASVSGLAITYTP
TAGYSGSDSFTYTATNTSGTSNAATVTITVSAPTLTFSPPAGALPGGTAATAYGGVTVTA
AAGTAPYTYAVNGTLPDGLTLDPASGLISGTPTTAGDYTFTVSATDANNATGMAAYSITI
AVEAPTVGDVSATVAANSTANAVTPDLGGGVADTLAIGTQATHGTASVSGLAISYTPTPG
YSGSDSFTYTATNPTGTSAAATVTITVSAPTFSFSPPAGALPGGTAATAYGGVTVTAAAG
TAPYTYAVNGTLPDGLTLDPASGLISGTPTTAGDYTFTVTATDANNATGTAAYSIAIAVE
APTAGDVSATVAANSTANAVTPDLGGGVADTLAIGTQATHGTASVSGLAISYTPTPGYSG
SDSFTYTATNASGTSNAATVTITVTAPTLTFAPSAGTLTGGIVGTAYDVIVVASAGTAPY
RYAVTSGELPAGLALDGITGRISGMPTTAGSYNFTVTATDANNATGTASYSIAIVMQAPT
ANNVRATVAANSAVNPITLDLTGGAANSVAIGAQPAHGTAAVSGLAITYTPTPGYSGSDS
FTYVATNATGTSPAATVAITVTAPTLAFSPTTGALASGTAGSAYGGATVIASGGTAPYRY
AVTSGQLPAGLALDGATGAIGGTPTRAGNHDFTVTATDANNASGTARYSIAIVAAPVDFA
FQPPAGALTDAMAGENYSQPIAAKGGTGPMLYRLASGALPKGMVLNISTGELTGPLAADA
GGNYTFTIEARDGNGATGTASYTVKVQARTITVSDKVVDVPAGSAPPDVYLNRGATGGPF
IGAETTFVEPAQAGTASIIQGELAQVGPVAAPVGWYLKFTPSRAYSGQVRVGFRMISALG
TSNTGTVTYNLAFDASGHAAEIDALVRDFVRTRQNLIASTIKVPGLIDRRRMAAGTDTVT
TRMTPSTVGVTLGFSTSLAQIEAARDSADGIDQAEASPFNIWLDSTFLMHRRKDDDDKWG
NFGMVSLGADYLLSEKALLGLSFHYDRMTDPTDEDAELSGNGWLAGPYASFELGKSIFWD
TSLLYGGSSNTIDMNMNAFDGTFDTRRLLMDTSVKGQWQLDDATVFTPALRAVYFSETVD
DYGVKNGAGDLIDLKGFTEEQLRVSLRAEIARQFSLENEMTLTPKLAGTLGYSGLDGAGM
FGSLSAGLSLKTAESWSIDTGLLFNIEGDGETSAGAKVGVSGRF
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccctggcgtatggaagtggtctgtgtcacgaagagcgatcctgcggacgcc
ttgctttccgctcttgtcctgtcgagcggcacgctcgagccggccttcgatacgaataac
ttcagctacacggccaaggtagccagtggcgtttccacccttgcggtgacgccgtccgcg
gtcggagccacagcgacggtgacgatcaacggcgaaaccgcaacgtccggctcaccaacc
aacgttgcgctcaatgttggcagtaatacgctgaagatcgccgtggcgaccgaggaccgc
tcggtcaagcggacctattggctcgtcgtcacacgcgccgcacctcccacgatcaccggt
ctcaccccttccaccggaagtacggccggtggacagtccgtgaccatcaccggcaccaac
ttcatcggtgtgagtgctgttaccttcggcggcacggctgcgaccaccttcaccgtcgac
agcgccacccagattaccgccattgcgccggcacgaactgccggaccggccgatgtgacc
gtgacgaccgtcgacaacacctccgtgacgcgcgcgaacggttatacctacggctccacg
ccggtcgtcaccgccgtcaagccggtcaacacgcccgcacgaacctacgccatcggcgcc
tcgctgatgttcgacgtggatttcgatcagacgatcgccatcagcaacggatttccgcac
ctcaaggccgtccttggcgctgtcgagcgacggatgaacttgatcggatatggctcgagc
accatgaggttcgcctacacggttgtcgaaaacgatctcgacgaagacggaatcgcgatc
gggtcgatgtcgctcgaaggcgccacaatcaaggattactaccacgtagcggacgcagac
gtaacactgcgcaacattgccgacatgtcaggcatcaggatcgatggcgtccggcccacc
gtcgcgtcaatcaaacccgctgggaccggcacgatcttcgacgttgaattttccgaaccg
gtcatggcggtggacatcggcaagttcaccctggtgaaaacaggaacggcgcaaggcacg
atcgacagtgtgtcgggatcgggatcggcctatcaggtgcatgtggcgaatgtttctgga
gacggcaccttggctctcagcttgtccacgggcacgggcataaaggatatcgccggcaac
gagatggccagtgcgttcaccggcggcacgcccatgatcgtcacgccgccctcaatcgac
gccagtctctcgggcatcggcatgtccaacggcacgctcacgccggccttcgacgccgcc
accaccagctacagtctctcggtagccaatagcgttaccagcatcgccgtcacaccggcc
agcacacatcccggcgccaccgtctcggtcaacggagccgtcgtctcggcgccgggcagc
gttcccgtcagcctccaggtcggcgacaacgccataaggatcgtggttacggcgcaggac
gccgtcacgaagaagacctatgacatcgtcgtcaatcgcgcgggcgcagttccggatgca
ccgactgatgtcagcgctgtgtcgggtgacggcgaggcgacggtcagcttcaccgcccct
gtgaatgcgggcaccacgccgatcagcagctacactgtgacgtctgatccaggtggtgcc
gtggcaaccggcggatcgagtcccatcaccgtgaagggccttgccaacggaacggcctac
accttcacagtgacggccaccaacagcatcggccccggtccggcctccgatccgtccggt
tcggtcacaccaaagcctgctccggtcgccaacgctgtgagtgcgacggttgcggcaaac
tccacggccaatctgatgacgctcagcctcagtggcggcgcggcggacacgctggccatc
ggcacccagccgacgcacggtgcggcttcggtttcgggactggcgatcacctacaccccg
acagctggctactccggttccgacagcttcacctataccgccaccaacaccagcggtacg
tcgaatgccgcgaccgtgacgatcaccgtttctgcgccgaccctcaccttctcgccgccg
gctggcgcgctaccgggtggaacggccgcgaccgcttatggcggcgtcaccgttacggcc
gcagccggcaccgcgccctatacctacgccgtcaacggcacgctgccggacgggctgacg
ctcgatccagcgtccggtcttatctcgggaacgccgacgaccgccggtgactacaccttc
acggtctcggccaccgacgccaacaacgcaacggggatggcggcctactcgatcacgatc
gcggtcgaggcgccgaccgtcggcgatgtgagcgcaaccgtcgcggcaaactccacggcg
aacgccgtcacaccagatctcggaggcggagttgccgatacgctggccatcggcacgcag
gcaacgcacggcacggcttcggtgtcgggacttgcgatcagctatacaccgacaccaggc
tattccggctccgacagcttcacctacaccgccaccaacccgaccggtacgtccgctgcc
gcgaccgtgacgatcaccgtttctgcgccgaccttcagcttctcgccgccggccggcgcg
ctaccgggtggaacggccgcgaccgcttatggcggcgtcaccgttacggccgcagccggc
accgcgccctatacctacgccgtcaacggcacgctgccggacgggctgacgctcgatcca
gcgtccggtcttatctcgggaacgccgacgacggccggtgactacaccttcacggtcacg
gccaccgacgccaacaacgctacggggacggcagcatactcgatcgcaattgcggtcgag
gcgccgaccgccggcgatgtgagcgcaaccgtcgcggcaaactccacggcgaacgccgtc
acaccagatctcggcggcggagttgccgatacgctggccatcggcacgcaggcaacgcac
ggcacagcttcggtttcgggacttgcgataagctatacaccgacaccaggctattccggc
tccgacagcttcacctacaccgccaccaacgccagcggtacgtcgaatgcggcgaccgtg
accatcaccgtcacggcacccacactcaccttcgcgccctcagccggcacgttgaccggg
ggtatcgtcgggacggcctatgacgtcatagtcgtcgcgtcggccggcaccgcgccctat
cgctatgccgtgacttcaggcgaactgcctgcaggcctcgcgctcgatggcatcaccggt
cgcatctcggggatgccgacgaccgccggaagctacaatttcaccgtgacggcaaccgac
gccaacaacgcaacgggaaccgcaagctactcgatcgccatcgtcatgcaggctccgaca
gccaacaatgtgcgtgcgactgtcgcagcaaactccgctgtcaacccgatcacgcttgat
ctcaccggcggcgcagcgaattccgtggccatcggcgcccagccggcgcacggcacggcc
gcggtgtcgggactcgcgatcacctataccccgacaccgggctattccggttccgacagc
ttcacctatgtggccaccaacgccaccggcacctcgcctgccgcaacggtggcgatcaca
gtgacagcgccgacactcgccttctcgccgacgactggcgcgctggcgagcggaaccgcc
ggaagcgcctatggcggcgccaccgtcatcgcctcgggcggaaccgcgccctatcgatat
gcggtcacatcgggccagcttcctgcgggcctcgcgctcgacggcgccaccggcgcgatc
ggcggcaccccgacccgggccggaaaccacgattttaccgtgacggcaaccgatgccaac
aatgcttccggaaccgcacgctattcgatcgcgattgtagcggccccagtcgatttcgcc
ttccagccacccgctggagcgctcacggacgccatggccggcgagaactatagccagcca
attgccgccaaaggcggaaccgggccgatgctctatcgcctggcatccggcgccttgccc
aagggcatggtcctcaacatctcgacgggtgaactgaccggcccactggccgcggatgcc
ggcgggaattacacgttcacaatcgaggctcgcgacggcaacggcgcaacgggaacggcg
agctataccgtcaaggtccaagcccgcacgatcacggtcagcgacaaggtggtcgatgtc
ccggccgggtccgcaccgcccgatgtctatctcaatcgcggcgccaccggcggtccgttc
attggggccgagaccacctttgtcgaaccggcccaagccggaacggcgtcgatcatccag
ggcgagttggcacaggtcggtccggtcgccgccccggttggctggtatctgaagttcacg
cccagcagggcgtattccggccaggtgcgcgtcggcttccgcatgatcagtgcgctcggt
acttccaacaccgggaccgtgacctacaatctcgccttcgatgcgtccgggcacgctgcg
gagatcgacgcgctcgtgcgcgacttcgtgcggacgcggcagaacctgatcgcctcgacc
atcaaggtgccgggcctcatcgaccggcggcggatggccgcgggaacggacacggtgacc
acgcgtatgacaccttccaccgttggcgttacacttggcttttccaccagtcttgcccag
atcgaggctgcgcgcgacagcgccgatggcattgaccaggcagaagcctcgccgttcaac
atctggctcgacagcacgttcctgatgcaccgccgtaaggacgacgatgacaagtggggc
aacttcggcatggtctcgcttggcgcagactatctgctgtcggagaaggcgctgctcggc
ctgtccttccactatgaccgaatgaccgacccgaccgacgaggatgcggagctgtccggc
aatggctggctcgctggcccctatgcctcattcgaactcggcaagagtatcttctgggat
acgagcctgctttatggcggctcgtccaacaccatcgatatgaacatgaacgcctttgac
ggcacgttcgacacgcgccgcttgctcatggacacctccgtcaaggggcaatggcagctg
gacgatgcaaccgtgtttacgccggcgctgcgggccgtctatttctccgagacggttgac
gactatggagtgaagaacggcgccggcgacctcatcgacctcaagggcttcaccgaggag
caattgcgggtcagtctgagggcggagattgcccggcagttcagccttgagaacgagatg
acgctgacgcccaagctcgccggcacgctcggctactccgggcttgatggcgcgggcatg
ttcggctcgctttcggccggactgtcactaaaaaccgcggagagctggtcgatcgacacc
ggtctgctattcaacatcgaaggcgacggtgagacatctgcgggcgcaaaggttggggtc
agtggacgtttttga
DBGET
integrated database retrieval system
