Enterobacter sp. R4-368: H650_16505
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Entry
H650_16505 CDS
T02700
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H650_16505 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enr03021
]
H650_16505 (rpoB)
03400 DNA repair and recombination proteins [BR:
enr03400
]
H650_16505 (rpoB)
Enzymes [BR:
enr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H650_16505 (rpoB)
Transcription machinery [BR:
enr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H650_16505 (rpoB)
DNA repair and recombination proteins [BR:
enr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H650_16505 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
SPG4
Motif
Other DBs
NCBI-ProteinID:
AGN86653
LinkDB
All DBs
Position
3269135..3273163
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIK
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKMYVEKGRRITARHIRQLEKDEIQHIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDSIEGSGIL
SKEDIIEVMKKLIGIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANTNLTEEGRFVDDLVTCRSKGESSLFSADQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVYLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIHSVLVSGGVEADKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLSTFSDEEVLRLAENLRKGMPIATPVFDGAKESEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gtactggatgtcccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagcggcgttccgctccgtgttcccgattaag
agctacagcggcaattcggaactgcaatacgtcagctaccgtcttggcgaacctgttttt
gacgttaaagaatgtcagatccgtggcgtaacgtattccgctccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtacctttgttatcaacggt
actgagcgtgttatcgtttctcagctgcaccgtagtcctggcgtcttcttcgacagcgat
aagggtaaaacccactcatctggtaaggtgctttataacgcacgtattattccttaccgt
gggtcatggctggacttcgagttcgacccgaaagataacctcttcgtgcgtatcgaccgc
cgccgcaaactgccggcgaccattattctgcgcgcgctgaactacaccactgagcagatt
ctcgatctgttctttgaaaaagttgtctttgaaatccgcgacaacaagttgcagatggaa
ctggtgccggaacgcctgcgtggcgaaactgcatccttcgatatcgaagcaaacggcaaa
atgtatgttgaaaaaggccgccgtattaccgcgcgccatattcgtcagctggaaaaagac
gaaattcaacacattgaagtaccggttgagtacatcgcaggcaaagttgcagctaaagac
tacgttgacgaatccactggcgagctgatctgcccggcaaacatggagctgtcgctcgat
ctgctggcgaagctgagccagtctggtcacaaacgtatcgaaaccctgttcaccaacgat
ctggaccacggtccgtacatctctgagaccgtacgtgtcgacccgaccaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggtgagccgccgactcgcgaagct
gcggaaagcctgttcgagaacctgttcttctctgaagaccgctacgatctctctgcggtt
ggtcgcatgaagttcaaccgttctctgctgcgcgacagcatcgaaggttccggtatcctg
agcaaagaagacatcatcgaagtgatgaaaaagctcatcggtatccgtaacggcatcggt
gaagtggatgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccaattccgcgttggcctggttcgtgtagaacgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgccgcaggacatgatcaacgcgaagcctatctctgca
gccgttaaagagttcttcggttccagccagctgtcacagtttatggaccagaacaacccg
ctgtccgagattacgcacaaacgtcgtatctctgcactcggcccaggcggtctaacccgt
gagcgcgcaggctttgaagttcgagacgtacacccgacccactacggtcgcgtatgtccg
atcgaaacgcctgaaggtccgaacatcggtctgatcaactccttgtccgtgtacgcacag
actaacgaatacggcttcctggaaacgccgtaccgtaaagtgaccgacggcgttgtgact
gacgagatccattacctttctgctatcgaagaaggtaactacgttatcgctcaggcgaac
accaacctgacggaagaaggtcgtttcgtagacgatctggtaacctgccgcagcaaaggc
gaatccagcctcttcagcgcagaccaggttgactacatggacgtttccacccaacaggtg
gtttctgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgacaagccgctggtt
ggtaccggtatggaacgtgctgttgctgttgactccggtgtaaccgcagttgctaaacgt
ggcggtactgttcagtacgtggatgcctctcgtatcgttatcaaagttaacgaagatgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaaatacacccgttctaac
cagaacacctgcatcaaccagatgccgtgtgtttatctgggtgagccaattgagcgcggc
gacgtgctggcagacggcccgtccaccgacctcggtgaactggcgctcggccagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccacgattcacatccaggaactggcgtgtgtgtct
cgtgacaccaagctggggccagaagagatcaccgcagacatcccgaacgtgggtgaagcc
gcgctctccaaactggatgaatccggtatcgtttacatcggtgcggaagtgaccggcggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgcgcgatcttcggtgagaaagcgtctgacgttaaagactcttctttgcgcgta
ccgaacggtgtttccggtaccgttatcgacgttcaggtctttacccgcgatggcgtggaa
aaagacaaacgtgcgctggaaatcgaagaaatgcagctcaaacaggcgaagaaagacctg
tctgaagaactgcagatcctcgaagctggcctgtttagccgtatccacagcgtgctggtt
tccggcggcgttgaagctgacaagctcgacaagctgccgcgcgaccgctggctggaactc
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccgggcgtgctgaaaatcgttaaggtttatctggccgttaaacgtcagatc
cagcctggtgacaaaatggcaggtcgtcacggtaacaagggtgttatctccaagatcaac
ccgatcgaagatatgccatacgatgaaaacggcacgccggttgacatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatccttgaaactcacctgggtatggct
gcgaaaggtatcggcgacaagatcaacgccatgctgaaacagcagcaagaagtcgcgaaa
ctgcgcgaattcatccagcgtgcatacgatctgggcgctgacgttcgtcagaaagtcgac
ctgagcaccttcagcgatgaggaagttctgcgtctggcagaaaacctgcgcaaaggtatg
ccgatcgcaacgccggtcttcgacggtgcgaaagagtctgaaatcaaggaactgttacag
ctgggtggcctgccgacttccggtcagatcacactgttcgacggtcgtaccggtgagcaa
ttcgagcgccaggttaccgttggctacatgtacatgctgaaactgaaccacctggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcggcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggaaccgggtatgcct
gagtccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgagctggaa
gacgagtaa
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