Enterobacter sp. R4-368: H650_16510
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Entry
H650_16510 CDS
T02700
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H650_16510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enr03021
]
H650_16510
03400 DNA repair and recombination proteins [BR:
enr03400
]
H650_16510
Enzymes [BR:
enr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H650_16510
Transcription machinery [BR:
enr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H650_16510
DNA repair and recombination proteins [BR:
enr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H650_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGN86654
LinkDB
All DBs
Position
3273240..3277463
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDANGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKTVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVAGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTSGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIVNAGSSDFLEGEQVEYSRVKIANRELEAAGKIGATYARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcatcgccagacatgatccgttcatggtcttttggtgaagttaagaag
ccggaaaccatcaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgttgaagtgacccagacgaaagtgcgtcgtgag
cgcatgggccacatcgagctggcgtctccgaccgcccacatttggttcctgaaatctctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatatcgaacgtgttctgtac
ttcgaatcctatgtggttatcgaaggcggtatgaccaatctggaacgtaaccagatcctg
accgaagaacagtacttggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggcgccgaagctattcaggccctgctgaaaagcatggatctggagcaagagtgcgaacag
ctgcgcgaagagctgaacgaaaccaactctgaaaccaaacgtaagaagctgaccaagcgt
atcaaactgctggaagcgttcgtacagtctggtaacaaaccggagtggatgatcctgact
gttctgccagtgctgccgccggatctgcgtccgctggttccgctggatggtggtcgtttc
gcaacgtcggatctgaacgatctgtaccgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggcggcgccggatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggccgtcgcggtcgtgcgatcaccggttccaac
aaacgtccgctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactattccggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgccaccaccatcaaagccgcgaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaacactgcaccgtctgggtatccaggcgtttgaaccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtctgtgcggcatataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagttggaagcg
cgtgcgctgatgatgtccaccaacaacattctgtctccggcgaacggcgaacctatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttaccgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgagtacgaaaaagacgctaat
ggcgaattcgtagcgaaaaccagcctgaaagacacgaccgttggccgtgcgattctgtgg
atgatcgttccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaggct
atctccaaaatgctgaacacctgttaccgcattctgggcctgaagccgaccgttattttt
gctgaccagacgatgtacaccggctttgcatatgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggcgaaaaaacacgagatcatcagcgaagcggaagccgaa
gttgctgagatccaggagcagttccagtctggtctggtgaccgctggcgaacgctataac
aaagttatcgatatttgggccgcggcgaacgatcgcgtatccaaagcgatgatggataac
ctgcaaactgaaaccgttattaaccgtgacggcgttgaagagcagcaggtttcctttaac
agcatctacatgatggccgactccggtgcgcgtggttctgcagcccagattcgtcagctt
gctggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaaccgcgaactccggttacctgacccgtcgtctg
gtagacgtggcacaggatctggtcgtaaccgaagacgattgtggcacgctggaaggcatc
accatgacgccggttatcgaaggtggcgatgttaaagagccgctgcgcgatcgcgttctg
ggtcgtgtaaccgcagaagacattctgaagccgggtactgcagatattctggttccgcgc
aatacgctgctgcacgaacagtggtgtgatctgctggaagcgaactctgttgactcagtg
aaagtgcgttccgttgtatcgtgtgacaccgactttggtgtgtgcgcccactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagccatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatccgcctg
agcaacgcgaagacggttgtgaactccagcggcaaactggttatcacctcccgtaacact
gagctgaaactgatcgacgaattcggtcgtaccaaagaaagctataaagtgccttacggt
gcggtaatggcgaagggtgatggcgagcaggttgccggcggtgaaaccgttgcaaactgg
gatccgcacaccatgccggttatcactgaagtggctggtttcatccgcttcaccgatatg
atcgacggccagacgattactcgtcagaccgacgaactgaccggtctctcttcgctggtg
gttctggactctgcagagcgtacctctggcggtaaagacctgcgtccggcactgaaaatc
gttgacgctaatggcaacgacgtactgatcccgggcaccgatatgcctgcccagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgttcagatcagctccggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggatattaccggtggtctgccgcgc
gttgcggatctgttcgaagcacgtcgtccgaaagagccggcaatcctggcggaaatcagc
ggtatcatctccttcggtaaagagaccaaaggtaaacgccgtctggtgatcacgccggtt
gacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgtttgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcaccgcatgacatt
ctgcgtcttcgtggcgtacacgcggtaacgcgttatatcaccaacgaagtacaggacgtt
taccgtctgcagggcgttaagatcaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgttaacgcaggaagctccgacttcctggaaggtgagcaggtt
gaatactctcgcgtcaagatcgctaaccgcgagctggaagcagcaggcaaaatcggtgca
acctatgcacgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgtgtgcttaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggccggt
actggttatgcgtaccaccaggatcgtatgcgccgtcgcgccgctggcgaactgccggca
gcaccgcaggtgactgcggaagacgcgtccgcgagcctggcagaactgctgaacgcaggt
ctgggtggttccgacaacgagtaa
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integrated database retrieval system
