Enterobacter sp. E20: NI40_003770
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Entry
NI40_003770 CDS
T04118
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
enx
Enterobacter sp. E20
Brite
KEGG Orthology (KO) [BR:
enx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enx03019
]
NI40_003770
Enzymes [BR:
enx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NI40_003770
Messenger RNA biogenesis [BR:
enx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NI40_003770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
DUF2732
Motif
Other DBs
NCBI-ProteinID:
ALL16302
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All DBs
Position
809132..811561
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AA seq
809 aa
AA seq
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MSSLPVAVILPELLAALHHSPQVLLNAPTGAGKSTWLPLQILKDGNIRGKIILLEPRRLA
ARNVAQRLAELLNEKPGETVGYRMRAETCVGPTTRLEVVTEGILTRMLQNDPELTGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDNERLRQALPDAPVISSEGRA
FPVERRYQPLPSHQRFDEAVAIATAELLRQEAGSLLLFLPGVGEIQRVQEQLSTRVSGDV
LLCPLYGALSLQDQRKAIDPAPAGQRKVVLATNIAETSLTIEGIRLVVDSAQERVASFDP
RTGLTKLLTQRISQASMVQRAGRAGRLEPGICLHLTSAEQAERAAQQSTPEILQSDLSGL
VMDLLQWGCPNPEQLTWLNPPPVVNLTAARTLLTQLGALEGERLTARGQKMAALGNDPRL
AAMLVAAQGDDEIATAAKLAAILEEPPRGGSSDLGQAFSRSQGNWQQRAQQLGKRLNSRG
GAPDSDKIAFLLAQAFPDRIARRRGLDGRYQLANGMGAMLDSDDALTRHEWLIAPLLLQG
SHSPDARILLAIAVEIDALTRACPQLLQQSDTVEWDDAQGTLKAFRRSQIGKLTLGTKPL
AKPSEDELHQAMLNGIREKGLSALNWTPEAEQYRIRLHCAAKWLPEYGWPAVDDETLLAT
LERWLLPQMSGVHSLRALKALDVKTALQNLLDWSLRQRLDSELPGHYTVPTGSRIAIRYH
EDNPPALAVRMQEMFGEATTPSIAEGRVPLVLELLSPAHRPLQITRDLGAFWAGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggtcgccgtcattcttcctgagcttctcgctgccttacaccattcc
ccacaggttttgctgaatgcccctacgggcgcgggcaagtccacctggctgccgctgcag
attctgaaagacggaaatatccgcgggaaaattatcctactggagccgcgcaggctggcc
gcgcgcaacgtggcgcagcgtctggcggagctgctgaatgaaaaaccgggcgaaacggta
ggttacaggatgcgtgccgagacctgcgttggcccgacaacgcgtcttgaagtggtcacc
gagggtattctcacccgcatgctgcaaaacgatccggagctgaccggcgtcgggctggtg
atcctcgatgagttccacgagcgcagcctgcaggcggatctggccctcgcgctgttgctg
gacgtgcagcaggggctacgcgacgatctccggctgcttattatgtcggccacgctggat
aacgagcggctacgacaggcattacccgatgcgccggtcatcagctcggaagggcgggcg
tttccggttgaacgccgctatcagccgcttccctcccaccagcgttttgacgaggccgtc
gccattgccaccgctgagctgctgcgccaggaagccggttccctgctgctgtttttaccc
ggcgtgggcgaaatccagcgcgtgcaggagcagctttctacccgcgtaagcggcgacgtg
ctgctttgcccgctctacggcgcgttgtcgctacaggatcagcgtaaagcgattgatccc
gcaccggcggggcagcgcaaggtggtgctggcaaccaacattgctgaaaccagtttgacc
attgaagggattcgcctggtggtggatagcgcgcaggagcgggtggcaagctttgaccct
cgtaccgggctgactaaactcctgacgcagcgcatcagccaggcgtcgatggtgcagcgc
gcgggccgcgcggggcgtcttgagccgggcatctgcctgcatttgaccagcgcggaacag
gctgaacgcgctgcacagcaaagcacgccggaaattttacaaagcgatttgtctggtctg
gtgatggacctgctccagtggggctgcccgaaccctgagcagctcacctggcttaatcct
cctcctgtcgtaaacctcaccgctgcgcgcacgttgctgacccagcttggcgcgctggaa
ggcgagcgtctgacggcgcgcggccagaaaatggcggcgctgggcaacgatccgcgtctg
gccgcgatgctggtggccgcgcaaggggatgatgaaattgccacggcggcaaaactggcg
gctattcttgaggagccgcctcgcggtggcagcagcgatctggggcaggcgttttcgcgc
agccagggtaactggcagcagcgggcgcagcagctgggtaaacgcctgaatagccgggga
ggagcgcctgacagcgacaagattgccttcctgctggcccaggctttcccggacaggatt
gcgcgtcggcgcgggctggacggtcgctaccagctggcaaacggcatgggggcgatgctg
gacagcgatgatgcgctgacgcgtcacgaatggctgatcgccccgctgttgctgcagggc
agccattctccggatgcgcgtatcctgctggcgatagccgtagagattgacgcccttacg
cgtgcctgtccgcagctgcttcagcaatctgataccgtggaatgggatgacgcccagggc
acgctgaaggcctttcgtcgcagccagattggcaagttgacgcttgggacgaagccgctg
gcgaagccgtcggaagacgagcttcatcaggcgatgctgaacggtattcgggaaaaaggg
ctgagcgccctgaactggacgccggaagcggagcagtaccgcattcgtctgcactgcgcc
gcgaagtggctaccggaatacggttggcctgcggtggatgacgagacgctgctcgctacg
cttgagcgctggctactgccgcaaatgagcggcgtacactctctgcgagcccttaaggcg
cttgatgttaagaccgcgttacagaatttactggactggtcattacgtcaacgtctggat
agtgaactgccagggcattacactgtgccgaccggaagccggattgccatccgttatcat
gaggataatccgccggcgctggcggttcggatgcaggagatgtttggtgaagccaccacg
ccgtccattgcggaagggcgtgtgccgttagtgcttgagctgctgtcgcctgcgcatcgt
ccattacaaatcacccgagatttgggagcgttctgggcgggaagctaccgtgaagtgcaa
aaagagatgaaggggcgatatcccaaacatgtctggccggacgatccggcgaatacggcg
ccgacgcggcgaacgaagaaatattcgtag
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