Exaiptasia diaphana (Aiptasia): 110234174
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Entry
110234174 CDS
T05080
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03013
Nucleocytoplasmic transport
epa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110234174
03015 mRNA surveillance pathway
110234174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110234174
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110234174
mRNA cycle factors
P-body specific factors
110234174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
RRM_1
Motif
Other DBs
NCBI-GeneID:
110234174
NCBI-ProteinID:
XP_020895191
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MGKSDVEKSKVSSRSKREKSVFPTKVVIRRLPPSLTEEKLKECLGALPEYDFFYFVDGKL
SFDPVLFSRAYINFVNPDDIIKFRDQFDGFLFTDBRGQNYPAVVEYAPYQGTPRKKNRKD
PKCNTIEQDKDYIAFLESLEKEVEPLPSIETHLEELEAKKDKNDEKKSTPLLEYLKIKRN
NRERARLENRKKRQEKEEAPKALKKNAQSSKDTKAQTXQREDKNKSGKKTDGRDVGRRDQ
GRREEAKKSVRENKDFPSDKEGKPQRSQKEREREGKNRPDSARPNSRADDRRYGNRRERS
DNNRRDNXDTSKGREERGRRFNDRYSDERRDSPSNDNRSNNKTRENVGKGKGKEESPKKN
ESEKETARGGADKREQDKEKDAXKRKESEREREREANRIKNKDRPDRAIYQPRSRTTRPN
SAEQVKAETKLSPDKAEGNEYKGRDKEXRDTKDRDKTRERNRDRRGGRDREXDKERDRYR
EPXEPREQDXVRKNDRDHCETTPKESQSVNQDRESNG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatccgacgtcgaaaagtcgaaagtttcgtctaggagtaagagggagaaaagt
gtttttcccacaaaggttgtaatccgaaggcttcctcccagtctgactgaagaaaagctg
aaagaatgtctaggtgctttacccgagtacgatttcttttattttgtggatggaaagctg
agcttcgatcctgtgctgttttcaagggcatacattaattttgtcaacccagatgatatc
atcaaattcagggaccagtttgatggcttcttgtttactgatracagaggtcaaaattat
ccagcggttgtagagtatgcaccatatcaaggaacaccaaggaaaaagaacagaaaggat
cccaaatgtaacacaattgaacaagataaagattacattgcttttcttgaatctcttgaa
aaagaagttgagccactaccaagtatagaaacacaccttgaggaactggaggccaaaaaa
gacaaaaatgatgaaaagaaatccactccactcctggagtatttgaaaatcaagagaaay
aacagagaaagagcgaggctggaaaataggaaaaaaaggcaagaaaargaagaagcaccc
aaggcactaaagaaaaatgcacagtccagtaaagacaccaaggcacaaactrcacaaaga
gaggacaagaataaaagcgggaaaaagacagatggtcgagatgtagggaggcgagatcaa
ggtcgtagagaggaggcaaagaagtctgtacgagagaacaaggattttccatcggataaa
gagggtaaaccgcaaaggagtcaaaaagaacgtgaacgagaaggaaagaatcgccctgat
tctgctcggccaaacagccgtgctgatgatcgaagatatggaaaccgtcgtgaacgttca
gacaataatagamgggataatrtggacacatctaagggrcgcgaagagagaggaagaaga
ttcaatgatagatactcagatgaacgacgtgacagcccctcgaatgacaaccgatcaaat
aataaaactagagagaatgttgggaaaggaaaagggaaagaagaatcacctaagaagaac
gagtcagagaaagagactgcacgaggtggagcagataaaagagaacaagataaagaaaag
gatgcaatkaaaagaaaggaaagtgaacgggarcgtgaacgagaagcaaaccgcataaag
aataaggatcgccctgatagagctatctatcaacctcgatcaagaaccacaaggccaaac
agtgctgaacaagtgaaagcagaaacaaaattaagtcctgacaaggcagaaggaaatgaa
tataaaggacgagataaagaaaracgagataccaaagaccgcgacaaaactcgtgaaaga
aaccgtgaccgtcgtggagggcgtgacagggaaygggacaaagaaagagatcggtatcgt
gaaccaaragaaccaagagaacaagatwgtgtcagaaaaaatgatcgtgatcattgtgag
acaactcccaaagaatcccaaagtgtcaatcaagatagrgaaagcaatggctaa
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integrated database retrieval system
