Exaiptasia diaphana (Aiptasia): 110252215
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Entry
110252215 CDS
T05080
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03013
Nucleocytoplasmic transport
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110252215
09122 Translation
03013 Nucleocytoplasmic transport
110252215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110252215
03041 Spliceosome [BR:
epa03041
]
110252215
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110252215
Spliceosome [BR:
epa03041
]
Complex C
Other components
EJC/TREX
110252215
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110252215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
110252215
NCBI-ProteinID:
XP_020914640
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MADGYEKTRSTVKNFIEKASGKDAAKELANLSSKLAESDAERKYSVDQAFRDLVKDSLLK
DGDVERSEQLIAFAIEACQQGTCSPTLPFILLSDVFDSITLQLCEKLFGFVEEQVSVWTM
PLFFSAGKNLLLRMCNDLLRRLSTQQNTVFCGRIQMFLARLFPLSERSGLNLMSQFNLEN
VTKYNKKTEFESKDQSSDSMITDDGTEILPSAPVDYNLYRKFWALQDFFRNPTQCYTNEG
WKKFYQSSKEILNVFNSHKLEHTSRKKLSKNKSNEKPDTPTRKTDSSEEPRYFPKFLTNE
KLLDLQLSDSNFRRTILLQFIILFQYLTGTVKFKSNHHVLSELQTVAIKDMTELVYQLMR
EIPPDGEKFTKVAEHVLDREENWILWKNEGCPSFIKDKEKEPSEVPSKAPRKRTRSFGEE
ISSGWKSKKIQMGNSELTRLWNLCPNNLEACSSEKRVFLPTLEEYFGEAIEQSDPAAMIE
DEYKLIKDSNFGWRALRLLARRSQHFFQPSSNPFKTLPDYLESVVLQLAQELPSVKSEDG
AVVENGSTESNP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggtacgaaaaaactagatcaacagtcaaaaattttatagaaaaggcttca
ggaaaagatgcggcgaaagagctggcaaatttatcttccaagctcgctgaaagcgatgca
gagaggaaatattctgtagaccaggccttcagagacctcgtcaaagatagtttgcttaaa
gatggtgatgtggaaagatctgagcaactgattgcctttgccatagaagcatgtcaacaa
ggaacttgctcaccaactcttccttttattcttctgagtgacgtatttgacagtataaca
ttgcaactttgtgaaaaactctttggttttgtcgaagaacaagtatcagtatggactatg
cctttattcttcagtgctggaaaaaatctacttcttagaatgtgcaatgatttattacga
agactttcaacgcaacagaatactgtattttgtgggagaatacaaatgttccttgcaaga
ctgtttcctctatcagaaagatcaggtctgaacctgatgagtcagtttaacttagagaat
gttacaaaatacaataaaaagactgagtttgagagcaaagaccagtcatctgattcaatg
atcactgatgatggtacagaaattctaccaagtgccccagtcgattacaatttatacagg
aagttttgggcccttcaagacttctttaggaaccctacacagtgttacacaaatgaggga
tggaaaaagttttatcagagctctaaagagatcctgaatgtgtttaacagtcataaattg
gaacacacttcaagaaagaaattgtctaagaataaatcaaatgagaaaccggacacccca
acaaggaaaacagatagcagtgaagagcctcgctattttccaaagttcctcacaaatgag
aagctcttggacttgcagctcagtgacagcaacttcagaagaactatactcttgcagttc
atcatattatttcaatacctcacgggtactgtcaaattcaaaagtaatcaccacgttctg
agtgaacttcaaactgtagcaattaaagatatgacagaattagtttatcagctaatgaga
gaaatacctcctgatggggaaaagtttacaaaagttgcagagcatgtattagacagggaa
gaaaactggatcttgtggaagaatgaaggttgcccaagttttatcaaagacaaagaaaaa
gaaccaagtgaagttccctccaaggcaccaaggaagagaacaagaagctttggggaagag
atctcttctggttggaaatccaagaaaatccaaatgggaaattcagaactgactcggtta
tggaatctttgtccaaacaatctggaagcttgtagttctgagaaaagagtatttttacca
acactagaagagtatttcggtgaagccatcgaacaatctgatccagcagcaatgatagaa
gatgagtataaattaatcaaagacagcaactttggatggagagcattacgtctgcttgct
cggcgtagccagcactttttccagccgagctcgaaccctttcaagaccctaccagattac
ctggaaagtgttgttttacaattagcccaggaactgccgtcagtgaagtctgaggacggt
gcagtagttgaaaatgggtcgactgaatctaatccgtaa
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