Enterobacter pseudoroggenkampii: QVH39_15830
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Entry
QVH39_15830 CDS
T09244
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
epu
Enterobacter pseudoroggenkampii
Brite
KEGG Orthology (KO) [BR:
epu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epu03400
]
QVH39_15830
DNA repair and recombination proteins [BR:
epu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
QVH39_15830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
UPF0547
zf-tcix
zinc_ribbon_2
zf-ribbon_3
SLFN-g3_helicase
AAA_22
AAA_16
DZR
TniB
Motif
Other DBs
NCBI-ProteinID:
WJW84713
LinkDB
All DBs
Position
3300609..3302369
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AA seq
586 aa
AA seq
DB search
MTFTLRPYQQEAVDATLAWFRKHREPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDLFRSEFSLLIVDECH
RISDDDDSQYQQILSHLKAVNPHLRLLGLTATPFRLGKGWIYRYHYHGMVRGDDKALFSD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNQELKKQKRITPH
IISQIEEFAQTRKGVMIFAATVEHAREITGLLPSGDAALITGETPGPERDSLIDAFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYTPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMA
LQPGADEKGEWLKITYYDEDGADVSERFRVQTPAQRTAFEQLFIRPHTRTPGVPLRWITV
ADIVRQQVLLRHPDFVVARKKGQFWQVREKLFDYEGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacacttcgtccctatcagcaggaagccgttgacgccaccctcgcctggttc
cgtaaacatcgcgagccggcggcgattgtgctcccgaccggcgcaggcaaaagcctggtc
attgccgagctggcgcgtctggcccgcggtcgcgtgctggtactggcgcacgttaaagag
ctcgtcgcgcaaaaccatgccaagtattgtgcacttgggctggaagccgacattttcgcc
gccgggctaaagcgtaaagagagccacggcaaagtggtgtttggcagcgtgcagtcggtg
gcccgcaatctggatctgtttcgcagtgaattttcgctgctgattgtcgacgaatgtcac
cgcatcagcgatgacgacgacagccagtatcagcaaatcctgtcacacctgaaagcggtg
aaccctcacctgcgcctgctgggcctgacggcgaccccgtttcgcctggggaaaggctgg
atctatcgctaccattatcacggcatggtgcgcggcgatgacaaggccctgtttagcgac
tgcatttacgagcttccgctgcgctacatgattaaacatggctacctgacgccgcctgaa
cggctggatatgccggtggtgcagtacgacttcagccgcctgcaggcgcaaagcaacggg
ttattcagcgaagcggatcttaaccaggagctgaaaaagcagaaacgtattacgccgcac
atcatcagccagatagaggagtttgcgcagacgcgcaaaggagtgatgatctttgccgcc
accgttgagcacgcgcgggaaatcaccgggttactgccttccggcgacgcggcgctcatc
accggcgagacgcccggcccggagcgcgacagcctgattgacgcgtttaaggcccagcgg
ttccgctatctggttaacgtgtcggtattgaccaccggctttgacgccccgcacgtcgac
ctgatcgccattttacgcccgaccgaatcggtcagtctgtatcagcaaattgttggccgc
ggcctgcgcctggcccccgggaaaaccgactgcctgattctggattatgcaggtaacccg
cacgatctctatacgcctgaagtcggcgcgccaaaagggaaaagcgacaacgtgcccgtg
caggtcttttgccctgcctgtgggtttgccaacactttctggggcaaaaccaccgccgac
ggcacgctgatcgaacattttggccgccgctgtcagggctggtttgaagatgatgacggg
catcgcgagcagtgcgattttcgtttccgctttaaaaactgcccgcagtgcaacgccgaa
aacgacattgccgctcgccgctgtcgggaatgtgacacggtgctggttgacccggacgac
atgctgaaagcagcattaaagctgaaagatgcgctggtactgcgctgttccggcatggcg
ttgcagcccggcgccgatgaaaaaggcgaatggctgaaaatcacctattacgacgaagac
ggggcggacgtcagcgagcgcttccgggtccagacgcctgctcagcgaacggccttcgaa
cagctgtttatccgcccgcacacccgcaccccgggcgtgcccctgcgctggatcaccgtg
gccgatatcgtgcgccagcaggtgctgttgcgccatccggattttgtggtcgcccgtaag
aaaggccagttctggcaggtgcgcgagaaactctttgactacgaaggtcgcttccgtcgc
gccaacgaattgcgcgggtaa
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