Enterobacter quasiroggenkampii: OM418_08285
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Entry
OM418_08285 CDS
T09002
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
equ
Enterobacter quasiroggenkampii
Pathway
equ03030
DNA replication
equ03430
Mismatch repair
equ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM418_08285 (holB)
03430 Mismatch repair
OM418_08285 (holB)
03440 Homologous recombination
OM418_08285 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
equ03032
]
OM418_08285 (holB)
03400 DNA repair and recombination proteins [BR:
equ03400
]
OM418_08285 (holB)
Enzymes [BR:
equ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM418_08285 (holB)
DNA replication proteins [BR:
equ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM418_08285 (holB)
DNA repair and recombination proteins [BR:
equ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM418_08285 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
WFC84196
LinkDB
All DBs
Position
1767057..1768061
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPHFEQLIGSYQAGRGHHALLIQALPGMGDDALIYAITRFLMCQQPEGHKSCG
KCRGCQLMQAGTHPDYYTLEPEKGKSALGIDAVREVSEKLYEHARLGGAKVVWLKDATQL
TEAAANALLKTLEEPPVKTWFFLSCRDPGRLLATLRSRCRLHHLAVPQESWALSWLEREV
TTSPESALSALRLSSGAPAAALALLQPDVWSQRETLCRAVEMALNNHDWLSVLPALNSDQ
AVERLHWLASLLLDALKLQQGATLLTNPDAWTLVNTLANRLSGTILHAILHEICQSREQL
LTVTGLNRELLLTDQLLRIEHYLQPGTTPPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccatggttgcgcccgcactttgaacaactgatcggcagctatcaggcg
gggcgggggcatcatgcgttactgattcaggcattgccgggaatgggcgatgatgcattg
atttatgccatcacccgttttctgatgtgccagcagccggaagggcataaaagctgcggc
aaatgccgtggctgtcagctgatgcaggcgggcacacatcctgactactacacgcttgag
cctgagaaggggaaaagcgcgctcggtatcgatgccgtgcgggaagtcagtgaaaaattg
tacgaacacgcgcggctgggcggcgctaaagtggtctggcttaaagacgccacgcagctg
accgaggcggcagctaacgccctgctgaaaactctggaagagccgccggtaaaaacatgg
tttttcctctcgtgccgtgacccgggacgcttgctggcgacgctgcgcagccgctgtcgt
cttcatcaccttgctgtgcctcaggaatcgtgggcgctgagctggctggagcgagaggtg
acaacgtcacctgagagtgcgttgtccgccttgcgcctgagcagcggcgcgcccgcagcg
gcgctggcattgctgcagcctgacgtctggtcacagcgagaaacgctttgccgggccgtc
gaaatggcactgaataaccacgactggctaagcgtattgcctgcgcttaacagcgatcag
gccgttgagcgtctgcactggctggcctcgttgctgctggatgccctcaaacttcagcaa
ggggcaacgctgctgaccaacccggacgcgtggacactggtgaatacgctggcgaaccgc
ctctcagggacgattcttcatgcgatacttcatgaaatttgccagagccgagaacagctt
ttaaccgtgacgggtcttaatcgcgagcttttactgaccgaccagttactgcgtattgaa
cactacctgcaacccggcaccacaccgccggtttcccatctctga
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