Agathobacter rectalis M104/1: ERE_03200
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Entry
ERE_03200 CDS
T02588
Name
(GenBank) Site-specific recombinase XerD
KO
K14059
integrase
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
ERE_03200
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_3
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
CBK92430
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Position
complement(278299..279594)
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AA seq
431 aa
AA seq
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MAKGSVRKKGKKWYYRFYVEDASGNLVQKEYAGTESKSETEKLLRQAMDDYESKKFVAKT
DNLTVGELLDMWAEEELKVGTLSNGTVENYLGAIRCIKKHPIAERKLKTVTAEHLQAFLD
LLTFGGEFPDGKVRKGYSKDYIHSFSAVLQQAFRFAVFPKQLITFNPMQYIKLKKQAEDV
DLFSDDEVEEGIQPISHEDYERLIEYLKVKNPPAILPIQIAYYAGLRIGEVCGLTWQDIN
LEEQCLTIKRSIRYDGTKHKNIIGPTKRKKVRIVDFGDTLTEILKTARKKQLKSRMQYGE
LYHRNFYKEAQDKNRVYYEYYHLDGTEEIPVDYKEISFVCLRPDGCLELPSTLSIACRSV
AKRLDGFENFHFHQLRHTYTSNLLSNGAAPKDVQELLGHSDVSTTMNVYAHSTRKAKRNS
ARLLDKVAGND
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggatctgtaagaaaaaaaggaaagaaatggtactaccgcttctatgtagaa
gatgcaagcggcaatctggttcagaaagaatacgctggaacagaaagtaaaagtgaaacg
gaaaaactgctccgtcaggcaatggatgattacgaaagcaagaaatttgtcgcaaagaca
gataatcttactgtaggagaacttcttgatatgtgggcggaagaagaactgaaagtcgga
acactcagcaatggtacagtggaaaattatcttggtgcaatccgttgtatcaagaaacat
ccgattgcagaacgcaaattaaaaaccgttactgctgaacatttacaggcatttctcgat
ctgcttacattcggtggggaatttccagatggaaaagtgagaaaaggatacagtaaagat
tacatccattccttttcagcagtattacaacaggctttccggtttgcagtatttccaaaa
cagttgattacttttaatcctatgcagtatattaagctgaaaaaacaggcagaggatgtg
gatttattctcagatgatgaggtagaagaaggcatacagcctatttcccatgaagattat
gagagactgatagaatacctcaaagtaaagaatccacctgcaatcctgccaatccagatc
gcatactatgcgggacttcgtatcggtgaagtttgcggattgacatggcaggacatcaat
cttgaagaacaatgcctgaccattaaaagaagtatccgctatgatggcacaaaacataaa
aacatcatcggaccgaccaagcgaaagaaagtaaggattgttgattttggcgatactctg
actgaaatactgaaaaccgccagaaaaaaacagcttaaaagccggatgcagtatggtgaa
ctttaccaccgcaatttctacaaggaagcacaggacaaaaacagagtgtattatgaatat
tatcatctggacggaaccgaagaaatcccggtagattacaaggaaatctcctttgtctgc
ctgagaccggacggatgtctggaactgccaagcacactcagcattgcctgccgatcagtt
gcaaaaaggctggacggatttgagaatttccatttccaccagttgcgacacacctacaca
agcaacctcctctcaaacggagctgccccaaaagatgtgcaggaactgttagggcactct
gatgtcagtaccacaatgaatgtctacgcccactctacaagaaaggcaaagcggaactcc
gccagacttcttgataaagtggcaggcaacgactaa
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