Eremothecium cymbalariae: Ecym_3168
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Entry
Ecym_3168 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_3168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_3168
03041 Spliceosome [BR:
erc03041
]
Ecym_3168
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_3168
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
Ecym_3168
Spliceosome [BR:
erc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
Ecym_3168
Complex B
Ecym_3168
Complex C
U2 SnRNP specific factors
Ecym_3168
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
Ecym_3168
TFTC complex
Ecym_3168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
11468752
NCBI-ProteinID:
XP_003645487
UniProt:
G8JRA1
LinkDB
All DBs
Position
3:complement(318158..322045)
Genome browser
AA seq
1295 aa
AA seq
DB search
MEKEELYLYHLTLQKQSNYVNSCIGHFVSYKQHQLVAESKSVQDGGRKRAKARKALQLCI
ATQTHLELYDVEEGTLYCVMRQPMFATILCMETLVVENRTFLILVSDSGNLTICNFVYRD
GKCRLETLSNEPMGRSGVRRLSPQTYLSVNPQGRCLMLSAMERNKVCYLIDFRGDELQVS
SPLEANRPNFVTIQTVCCDVGFDNPLFASLEIDLVDKSRYLFFYMLDLGLKHVAKLSEYV
LHDSTASFIVAVPNLEPYGIVTKQNTYDEGNTDEIIPFVIVCFENYISLRDLNGMYDINV
QIPTRRDAQRTLITACTVHKLRNDFFVLLQSNYGDLYKVRILPDNKDKSPTMLISYFDTI
PHAEKFHIFKNGYMFSNSELGNSYLYLFENLGEESEQNTLTSHMPGKRLLIEPHDELENL
SVADKLDLINPVTSSHVSEAVPLTVITKTLGATKTLKAGIELEEIISSRLPSTPLDIWTT
ALNNSKFHRLLFLALPKSTMILKIADGTVEELELEMNPFSLSEDRTLLIGSMGAQSIIQV
CENKLIQVAALSGDKYISKLEWFPPAGIRILDATCSNTQLVLALSNNEIVYFEIGTNDSL
NELQDRIELEDTINGLSVANGMRSNYLVVVCGDTSVKVYSLKMDDQNNFFEVVSMQALTS
SANSIKLVSSNDSLCLHIGLASGVYVRSRLDKHDGQLFDVRTKYLGSKPVDISFLPQMFP
FISDEEEEDEEEEENNDKDRISSGTNTATLSCVILHSNKTWVSYELDSVRLVRPLILARS
QSLKKVAPFTSNEIKLNGFCSISSAGTLVIGRLGKFNTLETWFELNAQYGDDTTSNNLKQ
LEESDDEQNEQDRNGSIEKMHKMKTYFGRCIVPDIDDENLLYIVDNYKSENFWKIYLMKN
ELYYKNIVSEENYQKISDYQVISAVIIRFGQDLRCLVVSTRDNKLVTFQIQITKKNQFRY
FQLIHVHDTPIDEQVHAMVAFGDKILVPISNALVLYGMGKKRLLKKSITLMPPSITKVVS
LDQWKSQRIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFS
NIWVLRLPLQCDKLIKEDFEGHLQVAVSHISKNIKECNFKWKLLNHFYLNDIPISLQTVS
SAQFSDRTNIIYTGLQGTVGCIIPLITRREVELFESVEQVMRDADYLFYLEQEERFSVAA
VDIDEYEESLGANDTYLRKKQKKHVPEGAYSTVGRDILSYRSYYNPVRHVIDGDLCERFF
TLHAREKKFLVSKLESKNTVDDIESLINNIRTNCL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagaattatacctttatcatttgacattgcaaaaacagagcaactatgtg
aactcatgcatcggtcacttcgtcagctataagcagcaccagttggttgcagagtctaaa
agtgttcaggatggtggaagaaagagggcaaaggctcgcaaggctttacaattgtgtatt
gcgactcagacgcatttagaattgtatgatgtggaagagggaactctatattgtgtgatg
cggcaaccaatgtttgctaccattctatgtatggagacgctggtggtggagaataggacg
ttcctaatacttgtatctgattcagggaacctaactatatgcaattttgtatatcgcgat
gggaaatgcaggttagagacgttgtctaatgagccaatgggaaggtctggagtaaggcga
ctgtccccacaaacttatctgtctgtgaatccacaagggagatgtctcatgctttcagcg
atggagaggaataaggtttgttatctcatagattttagaggtgacgagctgcaagtttcg
tctcctttagaggccaacagaccgaacttcgttactattcagacggtttgctgcgatgtc
ggatttgataaccctctatttgcatcattagagattgatctcgttgacaaatctcgatat
ttgtttttctatatgcttgatctagggctgaagcatgtagctaagctgtcggaatatgta
ctgcatgattctacggctagttttatcgtagcggttccaaatttagaaccgtatggtatc
gtaacgaagcagaatacgtatgacgaagggaatacagatgagattattccctttgttata
gtatgttttgaaaactatatatcgcttcgagatcttaatgggatgtatgatatcaatgtt
caaattcccacacgcagggacgcccagagaacattgattaccgcgtgtactgttcataaa
ctaaggaacgactttttcgtactccttcaatcgaactacggagatttatacaaggtgaga
atcttaccggataataaggataagagtcctaccatgttaatatcatacttcgacactatc
ccccatgcagagaaattccacatatttaagaatgggtatatgttttctaactctgaattg
ggcaatagctatctatacctgttcgaaaaccttggcgaggagagtgagcagaatactcta
acctcacatatgcctggtaagagattactcattgaaccgcatgatgaattagaaaattta
tctgttgcggataaactagatcttataaaccctgttacatcatcacatgtatcagaagca
gttccattgactgtcattacaaagacattaggcgctaccaaaacattgaaagccggaatt
gagctcgaggaaataatttcgtcacgactaccctcaactccactcgatatctggactaca
gcattgaataattcaaagtttcacaggctattattccttgctcttccaaaatcgactatg
atattgaaaattgccgatggaacagttgaggaacttgaactggagatgaacccattcagc
ttatccgaagatagaactttattgattggttctatgggcgctcaatctattatacaggta
tgcgagaacaaactcatccaagtagcggcactttcaggcgacaaatacatctctaaattg
gaatggtttccacctgctggtattcgtattctggatgcaacttgtagtaacacccagtta
gtacttgctttgtcgaataatgaaattgtttacttcgaaattggtacaaatgactcccta
aatgagctacaagatcggatagagttagaagatacaattaatggattatctgtagctaat
ggaatgcgatcaaactatctagttgtagtatgtggggatacttctgtgaaagtgtacagc
ctaaaaatggacgaccaaaataatttttttgaggttgtctccatgcaggctttgacctca
tcagccaattcaatcaaattggtctcctcaaatgattcattgtgtctgcatattggatta
gcttctggagtatatgtgagatctagacttgacaaacatgatggtcagttatttgatgtc
agaacaaagtatcttggctcaaagccggttgatatctcttttttgccgcaaatgttccca
tttattagcgatgaagaggaagaagacgaggaagaagaagaaaacaatgataaagataga
ataagttcagggacaaacactgcaaccctatcttgtgttatattgcattccaataaaact
tgggtgagttacgaactggattctgtgcggctagttagacctcttatactcgccagaagt
cagagcttaaaaaaagttgcaccatttacgtcaaatgagattaaattaaatggattttgt
tctatcagctcagctggaaccttagttataggcagacttggaaagttcaatactcttgaa
acttggtttgaactcaatgctcaatatggagatgatactaccagtaacaacctgaaacaa
cttgaggaaagtgatgatgaacaaaatgagcaagacaggaatggttcaatagaaaaaatg
cacaagatgaaaacctattttggtagatgtatcgtgccagatattgatgacgaaaattta
ctctatattgttgataactacaaatccgaaaacttttggaaaatctacctcatgaaaaat
gagttgtattataagaatattgtatcagaagaaaactaccaaaaaatctctgattatcaa
gtaatatcagctgtcataataagatttggacaggatttgaggtgcttagtagtatctacg
cgcgataataaattagtgacatttcagattcagataactaagaagaaccaattcagatat
tttcagttaatccacgtccatgacactccgattgatgaacaagtacatgctatggttgcg
tttggtgacaaaattttagttcctatatctaatgctctagttctatatggcatgggcaaa
aaacgactactaaagaaatctattacattaatgcctccatctattactaaggttgtttca
ttagatcagtggaaaagtcagaggatagctgttggtgatattcacgaatcagttacttta
tttcactttgataaacctaaaaatatgtttattcctgttgcagatgatacagtaaaaagg
catgttaccaccttaagatttctggatgaatgcactgtaataggaggggatagatttagt
aatatatgggtcttaaggttacctctgcagtgcgataaacttataaaagaggattttgag
gggcatttacaggtggctgtgagtcacatatccaaaaatataaaagaatgtaattttaag
tggaagttgctgaaccatttctatttgaacgatatcccaatatcattacaaaccgtttct
tcagcacagttttcagatagaactaatattatctataccggtttacagggcactgttggc
tgcataatccctttaatcacaagaagggaggtggaattatttgaatctgttgaacaagtt
atgagagatgcagattatttattttatcttgaacaagaggaacgcttttccgttgctgca
gttgatatagatgaatatgaagaaagccttggggctaacgatacctatttacgtaaaaag
cagaaaaaacatgtccccgaaggtgcatattcaacggtagggagagatattctgagttac
cgtagctattacaatcccgtaaggcatgtaatcgatggtgatctttgtgaaagatttttc
acattgcatgcaagggagaagaagttcctggtaagcaagctggagtccaagaatacagta
gatgatatagaaagtctgattaacaacataagaacaaattgtttataa
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integrated database retrieval system