KEGG   Eremothecium cymbalariae: Ecym_3168
Entry
Ecym_3168         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
erc  Eremothecium cymbalariae
Pathway
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_3168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:erc03021]
    Ecym_3168
   03041 Spliceosome [BR:erc03041]
    Ecym_3168
   03036 Chromosome and associated proteins [BR:erc03036]
    Ecym_3168
Transcription machinery [BR:erc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     Ecym_3168
Spliceosome [BR:erc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Ecym_3168
 Complex B
    Ecym_3168
 Complex C
   U2 SnRNP specific factors
    Ecym_3168
Chromosome and associated proteins [BR:erc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     Ecym_3168
    TFTC complex
     Ecym_3168
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 11468752
NCBI-ProteinID: XP_003645487
UniProt: G8JRA1
LinkDB
Position
3:complement(318158..322045)
AA seq 1295 aa
MEKEELYLYHLTLQKQSNYVNSCIGHFVSYKQHQLVAESKSVQDGGRKRAKARKALQLCI
ATQTHLELYDVEEGTLYCVMRQPMFATILCMETLVVENRTFLILVSDSGNLTICNFVYRD
GKCRLETLSNEPMGRSGVRRLSPQTYLSVNPQGRCLMLSAMERNKVCYLIDFRGDELQVS
SPLEANRPNFVTIQTVCCDVGFDNPLFASLEIDLVDKSRYLFFYMLDLGLKHVAKLSEYV
LHDSTASFIVAVPNLEPYGIVTKQNTYDEGNTDEIIPFVIVCFENYISLRDLNGMYDINV
QIPTRRDAQRTLITACTVHKLRNDFFVLLQSNYGDLYKVRILPDNKDKSPTMLISYFDTI
PHAEKFHIFKNGYMFSNSELGNSYLYLFENLGEESEQNTLTSHMPGKRLLIEPHDELENL
SVADKLDLINPVTSSHVSEAVPLTVITKTLGATKTLKAGIELEEIISSRLPSTPLDIWTT
ALNNSKFHRLLFLALPKSTMILKIADGTVEELELEMNPFSLSEDRTLLIGSMGAQSIIQV
CENKLIQVAALSGDKYISKLEWFPPAGIRILDATCSNTQLVLALSNNEIVYFEIGTNDSL
NELQDRIELEDTINGLSVANGMRSNYLVVVCGDTSVKVYSLKMDDQNNFFEVVSMQALTS
SANSIKLVSSNDSLCLHIGLASGVYVRSRLDKHDGQLFDVRTKYLGSKPVDISFLPQMFP
FISDEEEEDEEEEENNDKDRISSGTNTATLSCVILHSNKTWVSYELDSVRLVRPLILARS
QSLKKVAPFTSNEIKLNGFCSISSAGTLVIGRLGKFNTLETWFELNAQYGDDTTSNNLKQ
LEESDDEQNEQDRNGSIEKMHKMKTYFGRCIVPDIDDENLLYIVDNYKSENFWKIYLMKN
ELYYKNIVSEENYQKISDYQVISAVIIRFGQDLRCLVVSTRDNKLVTFQIQITKKNQFRY
FQLIHVHDTPIDEQVHAMVAFGDKILVPISNALVLYGMGKKRLLKKSITLMPPSITKVVS
LDQWKSQRIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFS
NIWVLRLPLQCDKLIKEDFEGHLQVAVSHISKNIKECNFKWKLLNHFYLNDIPISLQTVS
SAQFSDRTNIIYTGLQGTVGCIIPLITRREVELFESVEQVMRDADYLFYLEQEERFSVAA
VDIDEYEESLGANDTYLRKKQKKHVPEGAYSTVGRDILSYRSYYNPVRHVIDGDLCERFF
TLHAREKKFLVSKLESKNTVDDIESLINNIRTNCL
NT seq 3888 nt   +upstreamnt  +downstreamnt
atggagaaggaagaattatacctttatcatttgacattgcaaaaacagagcaactatgtg
aactcatgcatcggtcacttcgtcagctataagcagcaccagttggttgcagagtctaaa
agtgttcaggatggtggaagaaagagggcaaaggctcgcaaggctttacaattgtgtatt
gcgactcagacgcatttagaattgtatgatgtggaagagggaactctatattgtgtgatg
cggcaaccaatgtttgctaccattctatgtatggagacgctggtggtggagaataggacg
ttcctaatacttgtatctgattcagggaacctaactatatgcaattttgtatatcgcgat
gggaaatgcaggttagagacgttgtctaatgagccaatgggaaggtctggagtaaggcga
ctgtccccacaaacttatctgtctgtgaatccacaagggagatgtctcatgctttcagcg
atggagaggaataaggtttgttatctcatagattttagaggtgacgagctgcaagtttcg
tctcctttagaggccaacagaccgaacttcgttactattcagacggtttgctgcgatgtc
ggatttgataaccctctatttgcatcattagagattgatctcgttgacaaatctcgatat
ttgtttttctatatgcttgatctagggctgaagcatgtagctaagctgtcggaatatgta
ctgcatgattctacggctagttttatcgtagcggttccaaatttagaaccgtatggtatc
gtaacgaagcagaatacgtatgacgaagggaatacagatgagattattccctttgttata
gtatgttttgaaaactatatatcgcttcgagatcttaatgggatgtatgatatcaatgtt
caaattcccacacgcagggacgcccagagaacattgattaccgcgtgtactgttcataaa
ctaaggaacgactttttcgtactccttcaatcgaactacggagatttatacaaggtgaga
atcttaccggataataaggataagagtcctaccatgttaatatcatacttcgacactatc
ccccatgcagagaaattccacatatttaagaatgggtatatgttttctaactctgaattg
ggcaatagctatctatacctgttcgaaaaccttggcgaggagagtgagcagaatactcta
acctcacatatgcctggtaagagattactcattgaaccgcatgatgaattagaaaattta
tctgttgcggataaactagatcttataaaccctgttacatcatcacatgtatcagaagca
gttccattgactgtcattacaaagacattaggcgctaccaaaacattgaaagccggaatt
gagctcgaggaaataatttcgtcacgactaccctcaactccactcgatatctggactaca
gcattgaataattcaaagtttcacaggctattattccttgctcttccaaaatcgactatg
atattgaaaattgccgatggaacagttgaggaacttgaactggagatgaacccattcagc
ttatccgaagatagaactttattgattggttctatgggcgctcaatctattatacaggta
tgcgagaacaaactcatccaagtagcggcactttcaggcgacaaatacatctctaaattg
gaatggtttccacctgctggtattcgtattctggatgcaacttgtagtaacacccagtta
gtacttgctttgtcgaataatgaaattgtttacttcgaaattggtacaaatgactcccta
aatgagctacaagatcggatagagttagaagatacaattaatggattatctgtagctaat
ggaatgcgatcaaactatctagttgtagtatgtggggatacttctgtgaaagtgtacagc
ctaaaaatggacgaccaaaataatttttttgaggttgtctccatgcaggctttgacctca
tcagccaattcaatcaaattggtctcctcaaatgattcattgtgtctgcatattggatta
gcttctggagtatatgtgagatctagacttgacaaacatgatggtcagttatttgatgtc
agaacaaagtatcttggctcaaagccggttgatatctcttttttgccgcaaatgttccca
tttattagcgatgaagaggaagaagacgaggaagaagaagaaaacaatgataaagataga
ataagttcagggacaaacactgcaaccctatcttgtgttatattgcattccaataaaact
tgggtgagttacgaactggattctgtgcggctagttagacctcttatactcgccagaagt
cagagcttaaaaaaagttgcaccatttacgtcaaatgagattaaattaaatggattttgt
tctatcagctcagctggaaccttagttataggcagacttggaaagttcaatactcttgaa
acttggtttgaactcaatgctcaatatggagatgatactaccagtaacaacctgaaacaa
cttgaggaaagtgatgatgaacaaaatgagcaagacaggaatggttcaatagaaaaaatg
cacaagatgaaaacctattttggtagatgtatcgtgccagatattgatgacgaaaattta
ctctatattgttgataactacaaatccgaaaacttttggaaaatctacctcatgaaaaat
gagttgtattataagaatattgtatcagaagaaaactaccaaaaaatctctgattatcaa
gtaatatcagctgtcataataagatttggacaggatttgaggtgcttagtagtatctacg
cgcgataataaattagtgacatttcagattcagataactaagaagaaccaattcagatat
tttcagttaatccacgtccatgacactccgattgatgaacaagtacatgctatggttgcg
tttggtgacaaaattttagttcctatatctaatgctctagttctatatggcatgggcaaa
aaacgactactaaagaaatctattacattaatgcctccatctattactaaggttgtttca
ttagatcagtggaaaagtcagaggatagctgttggtgatattcacgaatcagttacttta
tttcactttgataaacctaaaaatatgtttattcctgttgcagatgatacagtaaaaagg
catgttaccaccttaagatttctggatgaatgcactgtaataggaggggatagatttagt
aatatatgggtcttaaggttacctctgcagtgcgataaacttataaaagaggattttgag
gggcatttacaggtggctgtgagtcacatatccaaaaatataaaagaatgtaattttaag
tggaagttgctgaaccatttctatttgaacgatatcccaatatcattacaaaccgtttct
tcagcacagttttcagatagaactaatattatctataccggtttacagggcactgttggc
tgcataatccctttaatcacaagaagggaggtggaattatttgaatctgttgaacaagtt
atgagagatgcagattatttattttatcttgaacaagaggaacgcttttccgttgctgca
gttgatatagatgaatatgaagaaagccttggggctaacgatacctatttacgtaaaaag
cagaaaaaacatgtccccgaaggtgcatattcaacggtagggagagatattctgagttac
cgtagctattacaatcccgtaaggcatgtaatcgatggtgatctttgtgaaagatttttc
acattgcatgcaagggagaagaagttcctggtaagcaagctggagtccaagaatacagta
gatgatatagaaagtctgattaacaacataagaacaaattgtttataa

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