Eremothecium cymbalariae: Ecym_4124
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Entry
Ecym_4124 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
erc
Eremothecium cymbalariae
Pathway
erc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_4124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_4124
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4124
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Ecym_4124
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Ecym_4124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
Motif
Other DBs
NCBI-GeneID:
11469325
NCBI-ProteinID:
XP_003646020
UniProt:
G8JT50
LinkDB
All DBs
Position
4:252476..254239
Genome browser
AA seq
587 aa
AA seq
DB search
MEDDDKVLKDFVSILDDLTFNSKHIVTSLTKMAEENISYAQQFVDAVEARITKCVPKQKL
YAFYALDSICKNAGSPYTIYFGRNLAKLYKQTYLIVDNATRTELITLFKTWMMLLPTGEL
LFDKDSLERIEQFLIKASSLHQRQAQAMAPPPTVPLLLKEIDKLSILTKERLTKKPDDSK
LQTKTILLQQLKQELQREKLPLQALHDFQQQLRHIFAQEQQVWQQQQKEQQQQYLAQQQQ
VQQQLSESGGAPPSLTHPYEESSLFGNATLSMSFLDSISSPNTSPLAPSTNKVSKVEVLY
RNLKHKNLLFEPAKESIVTLASKLEKTINPNKVRLPPFCILQDILGDVRSYYATRNVDIL
NTPNLQLSQQFVIQKNNPLTEQLIHVLYRAKPNKCTTCGVRFGSSAKERQLEVEHFDWHF
RINKRIKGTQNANAIIAKNIQSRSWYLNYEQWIQFKDEDIVSTNVDATAVNNMALALNQA
TTTTDSDNKAKNELQIRKKYIIVPDGAPDMSFQCPICTEVASAVYDEDLAEWVWRNCIDS
NGKYFHATCFYEASNNHTSKDNGSTGIDSDLERLKGLINGNSTKLSE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacgataaagttttgaaggactttgtaagcatattagacgatcttacgttt
aactcaaaacatatcgttactagtcttaccaaaatggcggaagagaatatatcttatgct
cagcagtttgtggatgcagtagaagctagaattactaaatgtgtgcctaaacagaagctg
tacgcattttatgcattggattcaatttgtaagaacgcaggatctccgtatacaatatat
tttggcagaaacttagccaagctatacaagcagacatatttgatagtggataatgcgaca
aggacagagttaataacgcttttcaagacttggatgatgctgctaccaacaggggagctt
ctttttgataaggattcgttagaaaggattgagcagtttctgattaaggcgagctctcta
caccagagacaggcgcaagcgatggcaccaccaccaacggttccgttattattgaaagaa
atagataaactaagtattctcacaaaagagcgattaaccaagaaacccgatgattcgaaa
ctgcagacaaaaaccattctcctccagcaactgaaacaagaattacaaagagaaaagctt
ccattgcaagcgctgcatgacttccaacagcaactacggcatatattcgctcaggaacag
caggtctggcagcagcagcagaaagagcagcagcagcagtatctggcacaacagcaacaa
gtacagcaacagctatcagaaagtggcggtgctcctccgtcacttacgcatccatacgaa
gaatcttccctttttggtaacgctacactttcaatgtcattccttgatagtatttcatcc
cccaatacgtcgccattggccccatcaacgaataaggtttcaaaggttgaggtgttatat
aggaatttgaagcataaaaatttgttgtttgaacccgcaaaagagtcgatagtcacgctt
gcctcaaagttagaaaaaacgattaatccaaacaaagtcagattacctccattctgtatt
cttcaggatatcctcggtgatgtgagatcttactatgccacaagaaacgtggatattttg
aacacaccaaatttacaactctcccagcaattcgtgattcagaagaacaatccgttgact
gaacaattaattcatgtcttataccgtgcaaaaccaaataaatgcactacttgtggtgtt
agatttgggagtagcgccaaagaacgtcagttagaggttgaacattttgactggcatttc
cgtattaataaaagaataaaaggtacccaaaatgctaatgcgataatagcgaagaatatt
caatctagatcgtggtacctaaattatgaacaatggatccagtttaaggatgaagatatt
gtttctacaaatgttgatgcaacagcggttaacaatatggcattggcattgaatcaggcc
acaacaactacggattcagataataaagccaaaaatgaactccagattcgcaaaaaatac
atcattgttccagacggtgcgcctgatatgtcttttcaatgccctatttgtactgaagta
gcatctgctgtatacgatgaagatttggccgaatgggtttggaggaattgtatcgattct
aatggaaagtactttcacgcaacatgtttctatgaagcctccaacaatcatacttctaag
gacaatggttcaacgggcatcgattctgatttggaaaggttaaagggtttgataaatggt
aatagtaccaaactgagcgagtaa
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