Agathobacter rectalis ATCC 33656: EUBREC_1057
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Entry
EUBREC_1057 CDS
T00909
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03030
DNA replication
ere03430
Mismatch repair
ere03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUBREC_1057
03430 Mismatch repair
EUBREC_1057
03440 Homologous recombination
EUBREC_1057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ere03032
]
EUBREC_1057
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_1057
Enzymes [BR:
ere01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUBREC_1057
DNA replication proteins [BR:
ere03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EUBREC_1057
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EUBREC_1057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
GIDE
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACR74819
UniProt:
C4ZGM2
LinkDB
All DBs
Position
962458..966003
Genome browser
AA seq
1181 aa
AA seq
DB search
MKGGRRYKNKERGIQMSFCHLHTHTEYSLLDGSNKIKEYVKRVKELGMNSAAITDHGNMY
GVVEFYKTAKANDINPVIGCEVYVAPNSRFDRETSHGDDRYYHLILLAENNTGYANLMKI
VSIGFTEGYYYRPRVDFETLERYHEGLICLSACLAGEIPRYIVRGFYDEAKEIARKYQDC
FGKDNFFLELQDHGIDDQKLVNQQLLRMSKELEIGLVCTNDVHYTYESDAEAHDVLLCIQ
TGKKVSDEDRMRYDGGQFFVKSEEQMRALFPYATEAIENTQKIADRCNVTLEFGNYKIPK
YEVPEGYDSAEAFLTELCEKGFREKYIGCGEYSADELKKIHADMDYELGIIKTMGFIEYI
LIVWDYINWCRTHDCWVGPGRGSAAGSRVCYCTGITDIDPVKYNLLFERFLNPERVSMPD
IDVDFEYAERYRAIEYVQQKYGHDSVTQIVTFGTMAARGVIKSVGKALDFPYAETDRLAK
MVPQELNITIDKALQMNPEFKGIYDSDARVHEMIDMAKRLEGLPNHTSVHAAGVVIYPGV
ASDYVPLGRANDGSPTAEYNMVQLEELGLLKMDFLGLRTLTVLKDSVKNIKASRGIDVDI
DHIDFNDKGTLDFIGTGKTEGVFQLESAGMQSFMKELSPQSFEDIVAGISLYRPGPMDFI
PNYIKGKNNPKEISYVTPELESILEPTYGCIVYQEQVMQIVQKLAGYTMGQADNIRRAMS
KKKQYVIDAERQSFVYGDEERGIKGCVANGIDEKAANSIYDSMVDFAKYAFNKSHAAAYA
KISVQTAWLKNYYPVEFMAALMTSVIDNSAKAAQYLYSCRDMGIKVLPPDINCGQGEFTA
EGDHVRYGMYAIKSLGRPVIDQIIEERESGGRYRTLSDFIERTCQKELINKRAIENLIKA
GACDSLDGTRKQMAMVYASIVDRVQHDKKSTMAGQMSLFDLVSDEDRQSFELKYPNVGEY
DAEEALAYEKEVLGIYLSGHPLEKYAATLKKNITANAIDFVLEEESGAVKIEDNAHVVIG
GMIATKTIKFTKYNQAMAFITIEDLTGTVEVIIFPRDYERYQRYLQDDAKIFVIGHATVE
DEQNGKIICEKIIPFDELPKQLWLRFDTMEDYKKNESRLLETIRESDGGDEVIIYIADTK
QMKKLGRNYSVNANNELMEQLLEFLDKENAKIVEKNIEKMC
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgggcggcgatacaaaaataaagaaagaggaatccaaatgtcattttgtcat
cttcacacccataccgagtacagtctgctcgatgggtcaaacaagataaaagaatatgta
aagcgcgtcaaggagcttggcatgaactctgccgcaatcacagaccatggcaatatgtac
ggtgtggtggagttttacaagacggcaaaggcaaatgatatcaatccggtcataggctgc
gaggtatatgtggcaccaaattcgcgctttgacagggagacaagccacggtgatgacagg
tattatcatctgattctgctagctgaaaataatacaggctatgctaatctcatgaagata
gtgtcaatagggttcacagagggctattattacaggccgagagtggattttgagacgctt
gagagatatcacgaggggcttatatgcctgtctgcctgtctggcaggagaaatccccaga
tacatcgtaagaggcttttatgacgaggcgaaggagattgcaaggaagtatcaggactgc
tttggaaaagacaacttcttccttgagctgcaggaccatggcattgatgaccagaagctt
gtgaatcagcagcttcttaggatgagcaaggagcttgaaatagggttagtgtgtactaat
gatgtgcactacacctacgagtccgatgcggaggcacatgatgtgcttttgtgcatccag
accgggaaaaaggtgtctgacgaggacaggatgcgctatgatggcggacagtttttcgta
aagagcgaagagcagatgagagcgcttttcccatatgctacagaggctattgagaataca
cagaaaattgccgacagatgcaatgtgacgcttgagtttggcaattacaagattccaaag
tatgaggtgccagagggctatgatagtgccgaagccttccttacagagctttgcgagaag
ggctttagggaaaaatacataggctgtggcgagtacagtgctgatgagcttaaaaagata
catgcagatatggactatgagcttggtatcataaagaccatgggctttatagagtatatc
cttatcgtgtgggattatatcaactggtgccgcacgcacgactgctgggtaggcccggga
cgaggctcagcggcgggaagcagggtgtgctattgtaccggaatcacggatattgatccg
gttaaatacaatctgctttttgaaagatttcttaaccctgagcgagtttccatgcctgat
attgatgtggatttcgagtatgcggagagatatcgcgccatagagtatgttcagcagaag
tacggacacgattctgtaacacagatagtcacctttggtacgatggcagcaagaggagtc
ataaaatcagtcggaaaggcgctggatttcccatatgcagagactgacaggcttgcaaag
atggtgcctcaggagcttaatatcacgattgacaaggctcttcagatgaacccggagttt
aagggcatttacgacagtgatgcgagagtgcatgaaatgatagatatggcaaaaaggctt
gagggactgccaaaccacacgtccgtgcatgcagcaggtgtggtaatctatccgggtgtg
gcgagcgattatgtgcctcttggaagggcaaacgacggaagccctaccgcagagtacaac
atggtacagctcgaggagcttggccttttaaagatggattttctggggcttcgtacactc
acggtgctaaaggattctgtgaagaatatcaaggcatcaaggggcattgatgtggatatc
gaccatattgatttcaacgataagggcacacttgactttatcggaacaggaaagacggaa
ggggtattccagctagagtctgccggtatgcaaagcttcatgaaggaactcagtccacag
agctttgaggacatcgtagccggtatttcgctctaccgtccgggtcctatggatttcatt
cccaactatataaagggcaagaacaatccaaaggagataagctatgtgacacctgagctt
gagagtattttagagccgacctacggctgtatagtataccaggaacaggttatgcagata
gtgcagaagctcgcaggctatacaatgggtcaggcggacaacatccgccgtgccatgagt
aagaagaagcagtatgtcattgacgcagagcgccagagctttgtgtacggagacgaggag
cgcggtataaagggctgtgtggcaaacggcatagatgaaaaggctgccaacagcatatac
gattcgatggttgattttgctaagtatgcgttcaacaaatcacatgcagccgcgtatgcg
aaaatcagtgttcagactgcatggcttaaaaattactatccggtcgaatttatggcagcg
ctcatgacttctgttatagacaattcagccaaggcggcgcagtatctttacagctgtcgt
gatatgggtattaaggtgcttccgccggatatcaactgtggacagggcgagtttaccgca
gagggtgaccatgtcagatatggcatgtacgccatcaaatctctaggcaggccggtaata
gaccagataatcgaggagcgggaaagtggcggcagataccgcacactctcagattttatc
gagagaacctgccagaaggagcttatcaacaagcgtgcgattgagaatctgataaaggcg
ggagcctgcgattcgcttgacggcacgagaaagcagatggcaatggtgtatgcatcgatt
gtggacagggtgcagcatgacaaaaagtcaacaatggctgggcagatgagcctgtttgac
ctggtctcagatgaggataggcagtcatttgagcttaagtatccaaatgttggtgaatat
gacgctgaggaagccctggcctatgaaaaagaggtgcttggcatctatttaagcggacac
cctctggaaaaatatgcagctaccctaaagaaaaacatcacagcaaatgcgatagatttt
gtgcttgaagaggagagcggtgccgtaaagatagaggacaatgcgcacgtggtaatcgga
ggcatgatagctacaaagacgattaagtttaccaagtacaatcaggccatggcttttatc
acgatagaggacctgacaggaactgttgaggtaattatttttccgagagattacgagcgc
taccagagatatttacaggacgatgctaaaatatttgttatcggacatgcgacagtcgag
gatgagcagaacggcaagataatctgcgagaaaatcataccgtttgatgagcttccgaag
cagctatggctcaggtttgatacgatggaggactataagaaaaatgagagcaggcttctt
gagacaatccgtgaatctgacggaggagatgaggtcataatttacatcgcggatacaaag
cagatgaaaaaacttggcagaaattattccgtaaatgcaaataatgagctcatggagcag
cttttggaatttttagacaaagaaaatgcgaaaattgttgaaaagaatattgaaaaaatg
tgctaa
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integrated database retrieval system
