Erwinia sp. Ejp617: EJP617_17130
Help
Entry
EJP617_17130 CDS
T01935
Symbol
hrpW
Name
(GenBank) hrp/hrc Type III secretion system-Hrp elicitor/effector region-harpin/effector protein
Organism
erj
Erwinia sp. Ejp617
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADP11394
LinkDB
All DBs
Position
complement(1889653..1891005)
Genome browser
AA seq
450 aa
AA seq
DB search
MSVLTLNISIPSSQGLFQPGEDNGLSGQNTNSALGQHPIDRQTIEQMAQLLGELLKPLLS
PQADNAAAGSNDQSNGVGNAGGLTGQNGAAGTTPQSVNQTMLGEMGNNGLDQAITPDGQG
GGQIGDNPLLKAMLKLIARMMDGQSDTFGQPGSGNNDASSGPSSAGNYPASNTSSGSSLG
GSSLLGHASSGGTSPTNSFSPPSTPTSPTSPLDFPSSPTSGAGGSTPVTDHADPVGSTGV
GAGNSVGFTSAGANPTVLHDTIIVKAGQEFDGKGQTFTAGSELGDGGQSESQKPLFMLED
GASLKNVTIGDDGADGIHLYGDAKIDNLHVTNVGEDAITVKPNSAGKKSHVDITNSSFEH
ASDKILQLNADTTLNVDNVKAKDFGTFVRTNGGQQGNWDLNLSHISAEDGKFSFVKSDSE
GLNVNTSDISLGNVENHYKVPMSANLKVAK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcttacgcttaacatcagtatcccgtcctcgcaggggctattccagcccggc
gaagacaacggacttagtggtcagaatacaaattcagcactggggcagcaccccatcgat
cggcaaaccattgagcaaatggcgcaattattgggggaactgttaaagccgctgctatcg
ccacaggcagataatgcagcggcaggtagcaatgaccagagcaacggagtgggcaacgct
ggcggcctgacggggcaaaatggcgcagcagggactaccccgcagtctgtcaaccagaca
atgctgggtgagatgggcaataacgggctggatcaggccatcacgcccgatggccagggc
ggcgggcagatcggcgataatcctttactgaaagccatgctaaagcttatcgcccgcatg
atggacgggcaaagtgacacgttcggccagccgggatccggcaataatgatgcgtcttcc
ggcccttcttcggcggggaattatcctgccagcaacacgtcttctggctcttctctcggg
ggaagttctctgttaggtcacgcgtcttctggcggcacatctcccaccaattccttctca
ccaccgtccacgccgacctcccccacctcaccgcttgatttcccgtcttcccccaccagc
ggtgccgggggcagcacgccggtaaccgatcatgctgaccctgtcggcagtaccggcgtg
ggggccggaaattcggtgggctttaccagcgccggcgctaacccgacggtgctgcatgac
accatcatcgtaaaggcgggtcaggagtttgatggcaaagggcaaaccttcaccgccggt
tcagaattaggcgatggcggccagtcggaaagccagaagccgctgtttatgctggaagac
ggtgccagcctgaaaaacgtcaccatcggcgatgatggggcggatggcattcatctttac
ggtgatgccaaaatagacaatctgcacgtcaccaacgtgggagaggacgcgataaccgtt
aagccaaacagcgccggcaaaaaatctcacgttgacatcaccaacagctcctttgagcac
gcctctgacaagatcctgcagctgaatgctgataccaccctgaacgttgacaacgtgaag
gccaaagactttggtactttcgtacgcactaacggaggtcaacagggtaactgggatctg
aatctgagccatatcagcgcagaggacggtaagttctcgttcgttaaaagcgatagcgag
gggctaaacgtcaataccagtgatatctcactgggcaacgttgaaaaccactataaagtg
ccgatgtcggccaatctgaaggtggctaaatga
DBGET
integrated database retrieval system
