Enterobacter roggenkampii DSM 16690: BFV67_06315
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Entry
BFV67_06315 CDS
T05556
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFV67_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ern03400
]
BFV67_06315
DNA repair and recombination proteins [BR:
ern03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFV67_06315
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFV67_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
SBDS_domain_II
AAA_30
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOP94805
UniProt:
A0A0W2D1I5
LinkDB
All DBs
Position
1361639..1363654
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESVIQR
FTIYPKTHYVTPRERIVQAMEEIKVELAERRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKARSVVEEDTVVLTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaattgaattctgctttccgtccgtctggcgatcagcctgaagcg
atccgtcgtctggaagaggggctggaagatgggctggcgcaccagacgctgctcggggtt
accggctcgggtaaaacctttaccattgccaacgtgattgcggatctccagcgccctacg
atggtgctggcgcccaacaaaaccctggcggcgcagctttacggcgagatgaaagagttc
ttcccggaaaacgccgttgagtatttcgtctcctactacgattactaccagccagaagcc
tatgtgccgagctctgataccttcatcgagaaagatgcgtcggtgaacgaacacattgag
cagatgcgactgtcggccactaaggcgctgctggagcgtcgcgatgtggttgtggtggcc
tctgtttcggcgatttacggcctgggcgacccggatctctatctcaagatgatgctgcac
ctgacgcaggggatgatcatcgaccagcgcgcgattttgcgtcgtctggcggagctgcag
tacacccgcaacgaccaggccttccagcgtggtacgttccgcgtgcgcggcgaagtgatc
gacatcttcccggcggaatcggacgatatggcgctgcgcgttgagctgtttgacgaggag
gtcgaacgcctgtcgctcttcgacccgctgaccggacacgttgagtcagtgatccagcgc
ttcaccatctacccgaaaacacactacgtgacgccgcgcgagcgtatcgtgcaggcgatg
gaagagatcaaagtggagctggccgagcgccgcaaggtgctgctggcgaacaataagctg
ctggaagagcagcgcctcagccagcgtacccagttcgacctggagatgatgaacgagctg
ggctactgctccggcatcgaaaactactcccgcttcctctccgggcgcgggccgggcgag
ccgccgccgacgctgtttgattacctgccagcagacggtttgctggtgatcgacgaatcc
cacgtcacgatcccgcagatcggcggaatgtaccgcggcgaccgggcgcgtaaagagacg
ctggtggagtacggattccgcctgccgtcagcgctggataaccgtccgatgaagtttgaa
gagtttgaggcgctggcgccgcaaaccatctacgtctcggccacgccgggcaactacgag
ctggaaaaatcgggcgatgaggtggttgaccaggtagtgcgtccgaccgggctgctggac
ccgattatcgaggtgcgtccggtggcgacgcaggtagacgacctgctctctgagatccgc
gcccgttccgccattaacgagcgcgtgctggtgaccacgctcaccaagcgtatggcggaa
gacctgaccgagtatctcgaagagcacggcgagaaggtgcgttatctgcactcggatatc
gataccgtggagcgcatggagattatccgcgacctgcgtctgggcgagtttgacgtgctg
gtggggattaacctgcttcgggaaggtctggatatgccggaagtctccctggtggcgatt
ctggacgcggataaagagggcttcctgcgttccgagcgttcgctgattcagaccatcggc
cgcgccgcgcgtaacgtcaacggtaaagcgattctgtacggtgacaaaattaccccgtcg
atggcgaaagcgatcggtgagacggagcgccgccgcgagaaacagcagcgctacaacgaa
gaacacggcattaccccgcaggggctgaacaagaaggtggtggatattctggcgctgggc
cagaacattgccaaaaccaaagcgaaaggccgcggcaaggcgcgttcagtggtggaagaa
gataccgtcgtgctgacgccgaaggcgctgcagcagaagatccacgagctggaagggcag
atgatgcagcacgcgcagaacctggagttcgaagaggcggcgcagatccgcgaccaactt
catcagctgcgggatctgtttatcgcggcatcgtga
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integrated database retrieval system
