Encephalitozoon romaleae: EROM_010460
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Entry
EROM_010460 CDS
T03458
Name
(RefSeq) RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ero
Encephalitozoon romaleae
Pathway
ero03022
Basal transcription factors
ero03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EROM_010460
09124 Replication and repair
03420 Nucleotide excision repair
EROM_010460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_010460
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_010460
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EROM_010460
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EROM_010460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
20520672
NCBI-ProteinID:
XP_009263887
UniProt:
I7ACS9
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All DBs
Position
I:45848..47092
Genome browser
AA seq
414 aa
AA seq
DB search
MKSEVSQAWAYPIDIIEYFGMLPDHSKAQLYGAPIFAVSFLKIFDEKTTRFIFDLLLMSH
SISSLRDIEGIKETLRTLLKIQMIEKKGDNIYLDASFRRSLMEGFCILKMEKHYKSTGKG
LEIDENESNGKFEAILRSIVNREYRIQAFGIGEVLMFGGLLRKDRNITNRGFEFLLKTKK
EQLWCLVLLSLKYFLRSVEEEIYALEALFELSTKTIETAHHQDGRMDGRLLKYLEALGIL
RVCGERLAIGRSFVQLFEASERNRREFIIVETNNKIYAYTNSEYEKSVIHLFCNVSVSLP
NLIKGSITEESVNVAFDKGITGKQIIHFLEASVKPGSLPPAITSQIMIWESKRNRIFMVP
GYIYSNFLNLSDYQRVLEFCTERSYLIESDVGKRMIVVKLEGHELVREFIKTIL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgaagtctcccaagcatgggcatatccaatagacattatagagtattttgga
atgcttccagaccactcgaaagcacagctatatggggcacccatatttgcagtatctttt
cttaagatttttgacgagaaaacaacgaggtttatatttgacctgctactgatgtcgcac
tccataagctccttgagagatatagaggggattaaggaaaccttgagaacgctgctgaag
atccagatgatcgaaaagaaaggagacaatatctatttggatgcgagtttcagaagatcg
ctaatggaagggttttgcatactcaagatggagaagcattacaaaagcactggaaagggg
ttagaaattgacgagaacgaaagcaatgggaagtttgaggccattctgaggtctattgtc
aacagggagtacaggatccaagcgtttggaatcggggaggttcttatgtttgggggtctt
cttagaaaagacagaaacataacgaatagaggatttgagtttcttctgaagacaaaaaag
gagcagctatggtgccttgtgctcttatctttgaagtacttccttaggtcggttgaggag
gagatttatgcgcttgaggcactgtttgaattgagcacgaagactattgaaactgcacac
caccaggatggtcggatggatggaagactactgaagtatcttgaggcgctaggaattctg
agggtctgtggagaaagacttgccattggaagatcctttgtacagctatttgaggcatct
gagcgtaacagaagggagtttataatagttgaaaccaacaataagatatatgcatacaca
aactctgaatatgagaagtctgtaatccacctgttttgtaatgtgtctgttagccttcct
aatcttataaagggaagtataacagaagagagtgtgaatgttgcgtttgacaaaggaata
actgggaagcagataatacatttcttggaagcaagtgtcaaaccagggagcctaccacct
gcaattaccagtcagataatgatatgggaatctaaaaggaacaggatatttatggtgcct
gggtatatttactcgaacttcttgaacctgtcagactatcaaagagtattagagttttgc
accgaaagaagttatttgatagagtcggatgttggcaaaaggatgatagttgtaaagtta
gaagggcatgagcttgttagagaattcataaaaactatcctctag
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