Encephalitozoon romaleae: EROM_031240
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Entry
EROM_031240 CDS
T03458
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03082
ATP-dependent chromatin remodeling
ero03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EROM_031240
03083 Polycomb repressive complex
EROM_031240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ero03036
]
EROM_031240
Enzymes [BR:
ero01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EROM_031240
Chromosome and associated proteins [BR:
ero03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EROM_031240
HDAC complexes
Sin3A-HDAC complex
EROM_031240
BRAF-HDAC complex
EROM_031240
REST complex
EROM_031240
SHIP complex
EROM_031240
MiDAC complex
EROM_031240
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EROM_031240
Heterochromatin formation proteins
Other heterochromatin formation proteins
EROM_031240
Chromatin remodeling factors
NuRD complex
EROM_031240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
20521038
NCBI-ProteinID:
XP_009264243
UniProt:
I6ZT13
LinkDB
All DBs
Position
III:complement(149729..150976)
Genome browser
AA seq
415 aa
AA seq
DB search
MNNKRVVYFYDPEIGTFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDVLRPFQASYENLT
NFHAVDYINFLSSVSSENMEEMIKDLHKFNIRDDCPVFPGLYDYCKLTSGGSIYAAQKIN
SGKYDVAINWAGGLHHAKRSEASGFCYVNDIVLGILELLKYNKRVLYIDIDVHHGDGVEE
AFYTTDRVMTVSFHKYGDYFPGTGMVTDIGLAKGKGYSVNVPLRDGIDDESYFSIFKPVV
SKVIEVYRPDAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTI
GNVSKAWAYGTSVVLDVEIPREIPYNEYFDYYAPTYKIDVPTSNMKNQNTKESLEDIVAK
VHENLRGVSHAPSVQMSTIPPSFISDESDDEEISKKKIGEDSDDYKAFSGSREEL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagagagtagtctacttctatgaccctgaaattggaacctttagttatgca
atgggacatcccatgaaacctctgagagtaaagatgacccatactctcttggtcgggtat
gagctttacaaatacatggatgttctcagaccatttcaggcgtcatacgagaatctaaca
aactttcatgcagtagattatataaactttttgtccagtgtctctagtgaaaacatggag
gaaatgattaaggaccttcacaagttcaacattagagatgattgccctgtgtttccaggg
ctttatgactactgcaaactcaccagtggggggagtatttatgcagcacagaagattaac
tctggaaaatatgatgttgcaattaattgggctggagggttacatcatgctaagagaagt
gaagcctcggggttttgctatgtgaatgacatagtcctaggaattcttgagctcctgaaa
tataacaaaagggttctatacatagatatagatgttcatcacggggatggggttgaagag
gcattctataccactgacagggtgatgactgtctccttccataagtacggagattatttt
ccgggaactggaatggtcacagacatcgggctggcgaaaggtaagggatattcagttaat
gttccattgagagatgggattgatgatgaaagttatttcagtatattcaagcccgttgtc
agtaaagttatagaggtatataggccagatgcgattgtattacaatctggggctgattcg
ctctcgggggataagctagggtgttttaatctatcccatctaggacactccaggtgtatt
aaatttgtgcagagcttcaatattccccttattcttcttggaggagggggatacacaatt
ggaaatgtttcaaaggcatgggcctatggaacaagtgttgttctggatgtcgagatccct
agagagattccttacaacgagtattttgattactatgcaccaacatacaaaatagatgtt
cctacatcaaatatgaaaaaccagaacacaaaagaaagcttggaagatattgtggcaaaa
gtgcacgagaacctaaggggtgtttcccatgctccttcggtacaaatgtcaactatcccg
ccctcttttattagtgatgagagtgatgatgaagaaatttcaaagaagaaaataggagaa
gactcagatgactacaaagcattctctggttcaagggaagaattgtaa
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integrated database retrieval system