Encephalitozoon romaleae: EROM_081090
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Entry
EROM_081090 CDS
T03458
Name
(RefSeq) DEAD box RNA helicase-like protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EROM_081090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ero03041
]
EROM_081090
03009 Ribosome biogenesis [BR:
ero03009
]
EROM_081090
Enzymes [BR:
ero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EROM_081090
Spliceosome [BR:
ero03041
]
Complex A
U1 snRNP components
U1 related factors
EROM_081090
Complex B
EROM_081090
Ribosome biogenesis [BR:
ero03009
]
Eukaryotic type
Pre-60S particles
Helicases
EROM_081090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
20521844
NCBI-ProteinID:
XP_009265022
UniProt:
I7AFL3
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All DBs
Position
VIII:103741..105222
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AA seq
493 aa
AA seq
DB search
MTYRGYSGDKRGFRGPSRVDRGSRYPTRTRREPQRYEPMAELPSVEFQKNFYKEAESISK
MNASEVASFRKASEMVVKGMNIPHPIHKFEDVGFPHRVVEDLVRKGFEGPTPIQAQGWPM
ALSGRDMVGIAQTGSGKTLSFILPALVHAKDQPPLRRGDGPIVLVLAPTRELVMQIKKVA
DEFCEMFDLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHEQGHAPLGRVTFLVL
DEADRMLDMGFEPQLRKIIPKTNPNRQTLMWSATWPKEVRGLAESYMNDYIQVVIGNEEL
KTNSKIKQVIEVCNGRDKEDKLLGVLDKFKGDRIIVFCNMKRTCDDLEYVLNRSGYGAAA
LHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVNDIKLVINFDFPGSCEDYVHRIG
RTARGNTKEGISHTFFTINDKGNARELIRMLKEAKQVVPSDLEDMVRASNDRYGSRGSRY
DYRGRASRFSYRG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacagagggtatagcggagataaaagagggtttcgagggccttcccgagttgac
aggggcagcagatatcccactaggacaagacgtgagccacaaaggtatgagccgatggct
gagcttccttctgttgagttccagaagaacttctataaagaggccgaatctatcagtaaa
atgaatgcttccgaggttgcttcgtttagaaaggcaagcgagatggttgtcaagggaatg
aatatcccccacccgattcacaagtttgaagatgtagggtttcctcatagggttgttgag
gatcttgttagaaaaggatttgaaggccctactcccattcaggcccaaggatggccgatg
gcactaagtggaagggatatggttggaattgctcaaacggggtccgggaagactctaagt
tttattctaccagcactggttcatgcaaaagatcagcctcctcttaggaggggggatggg
ccgattgtacttgtactggcaccgactagagagcttgtgatgcagattaagaaagttgcc
gatgagttctgtgaaatgtttgatctaaggagcacagctgtgtatggaggggcttcatca
cagccacaaataagagccctgcatgaaggtgcagaggtggttattgctacacccgggaga
ctgattgatctacatgagcagggacatgcaccacttggaagggttacatttcttgtgctt
gatgaagctgatagaatgcttgatatgggctttgagccacagcttagaaagattattcca
aagacaaatccaaacagacaaactctaatgtggagtgcaacatggccaaaagaagtaaga
ggattagccgaaagttatatgaatgattacatccaagtggttattgggaatgaagagctt
aagactaatagcaagatcaagcaagtgattgaggtatgtaatggacgggacaaagaagac
aagctacttggggtccttgacaagttcaaaggggataggattattgtgttctgcaacatg
aagagaacttgtgatgatctggagtatgtgctgaacaggtctgggtatggagcagcagct
ttgcatggagacaagtcacagaacattagggataaggtgcttgatgatttccgaagtgga
agaagaccgattctgatagctaccgaagttgcaggaagaggacttgatgtaaacgatatc
aagcttgtgatcaactttgattttccagggtcttgtgaagactatgtccataggatcgga
aggacggcaagagggaatacaaaggaagggatatcacatacattctttaccattaatgac
aagggaaatgcacgagaattgataaggatgcttaaagaagccaagcaagtggttccctcc
gatcttgaagacatggtgcgggcatcaaacgatagatatgggtccaggggctccagatat
gactacagaggaagagctagtagattctcttacagaggatga
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