Erwinia rhapontici: LJN55_15165
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Entry
LJN55_15165 CDS
T08392
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
erp
Erwinia rhapontici
Pathway
erp00521
Streptomycin biosynthesis
erp00523
Polyketide sugar unit biosynthesis
erp00541
O-Antigen nucleotide sugar biosynthesis
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01250
Biosynthesis of nucleotide sugars
Module
erp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LJN55_15165 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LJN55_15165 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LJN55_15165 (rfbC)
Enzymes [BR:
erp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LJN55_15165 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UDQ78800
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Position
complement(3240911..3241450)
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AA seq
179 aa
AA seq
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MNVIRTEIPDVLIFEPKVFGDERGFFFESFSQKVFEEAVGRKVEFVQDNHSKSSKGVLRG
LHYQVAPHAQGKLVRCVVGDIFDVAVDIRSDSPTYGQWVGVKLSAENKKQLWIPEGFAHG
FIALTEGVEILYKTNNLYNKESERSIKWDDPDLNIGWPVNASCISEKDQQASAFKDILM
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgattagaacagaaataccggatgtgctgatttttgagcctaaagtgttcggg
gatgaacgaggtttcttttttgagagcttcagccagaaagtatttgaagaagcagtaggc
cgtaaggtggagtttgtgcaggataaccattcgaagtcttcaaaaggggttcttcgcggt
ttgcattaccaggttgcgcctcatgcgcaggggaagttggtacgttgtgttgttggtgat
attttcgatgttgcggtagatatacgttctgattctccaacttatgggcaatgggtgggt
gttaagttatccgcagagaataaaaaacagctttggataccagaaggttttgcccatggc
tttattgcacttacagaaggtgtggaaattctatataaaaccaacaacctttataacaaa
gaatctgaacgttcaattaaatgggatgatcccgatttaaatattggatggccagttaac
gcctcttgcatttctgagaaagatcaacaagcttcagcgttcaaagatatattaatgtaa
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