Erwinia rhapontici: LJN55_15645
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Entry
LJN55_15645 CDS
T08392
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_15645
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LJN55_15645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_22
AAA
TniB
zinc_ribbon_2
AAA_16
zf-tcix
DZR
Glyco_tran_WecG
UPF0547
Motif
Other DBs
NCBI-ProteinID:
UDQ78893
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Position
3354797..3356551
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATIRYFRHTSQPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESHAKVVFGSVQSVARNLAQFSAEFSLLIIDECH
RISDADDSQYQQIINQLRQHNPQLRLLGLTATPYRLGKGWIYQFHYHGMVRGDERAFFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLQAQENGLFSEADLNRELKQQQRITPH
IIQQIVEFAQQREGVMIFAATVDHAREVLGLLPGSKALISAGTPAAERDALIAAFKAREL
RYMVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DIFTPEVGAPKGKSDNQPVQVFCPGCGFANTFWGKTTQDGTLIEHFGRRCQGVLEDDDGL
REQCDYRFRFKNCPHCHAENDIAARRCRECDAILVDPDDMLKAALKLKDALVLRCAAMVL
ESGSDDQGEWLKVRYFDEEATEVSERFRLKTPAQRTAFEQLFLRPHQRAPGVPLGWKSAA
DIIALQPLLRHPDFVVARKQRHYWQVREKVFDYQGRFRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaccctacgtccctatcagcaggaagccgtggatgccaccatccgctatttc
cgccacacgtcgcaacctgcggtcattgtcctgcctaccggagccggtaaaagcctggtg
attgcagaactggcacgggtcgcacgcgggcgcgtgctggtgctggcccacgtgaaagag
ctggtggcgcagaaccacagtaaatatcaggcatatgggctggaggccgatatctttgcc
gccgggctgcaacgtaaagagagccatgccaaggtggtgtttggtagcgtgcagtcagta
gcacgaaatctggcgcagttcagtgccgaattttcgctgctgattatcgacgaatgccac
cgcatcagcgatgccgacgacagccagtaccagcaaattatcaatcagctgcgccagcat
aacccgcagctccggctgctgggcctgaccgccacaccgtatcgcctgggcaaaggctgg
atttatcagttccattatcacggcatggtcagaggcgacgaacgcgccttctttcgcgac
tgcatctatgagctaccgctgcgctatatgatcaaacacggctttctggtgccgcctgag
cggctggatatgcccgtggtgcagtatgatttcagtcgtttacaggcgcaggaaaacggc
ctgttcagcgaggcggatctcaaccgtgaactgaaacagcaacagcgtattacgccgcac
attatccagcagattgttgaatttgcccaacagcgggaaggcgtgatgattttcgccgcc
acggtcgaccatgcgcgtgaagtgctcggattgctgccgggcagtaaagcgctgatcagc
gcgggcacgccggctgccgagcgtgacgcgctgatcgccgcatttaaagcacgtgaactg
cggtatatggtcaatgtgtcggtgctgacgacagggtttgatgccccgcatgttgatctt
atcgctattctgcgccccaccgagtcagtcagcctgtatcaacaaattgtcggacgcggg
ctgcggctcagccctggtaaaacagactgtctgatcctcgactatgccggtaacccccac
gatatttttaccccggaagtcggtgcgcccaagggtaaaagtgataatcagccggtgcag
gttttctgccctggctgtggttttgccaataccttctggggtaaaaccactcaggatggc
acccttatcgaacattttggccgccgctgccagggcgtgctggaggatgatgacgggctg
cgtgaacagtgtgattaccgttttcgctttaaaaactgcccacactgtcatgctgaaaat
gatattgccgcacgccgctgccgggagtgtgatgcaatccttgttgaccctgacgatatg
ctgaaagccgcactgaaactgaaagatgcgctggtgctgcgctgtgcggcgatggtgctg
gagagcgggagcgacgaccagggcgaatggctgaaggtgcgttacttcgatgaagaagcg
accgaagtcagcgagcgctttcgtttaaaaaccccggcgcagcgcaccgcctttgagcag
ctatttctgcgcccgcatcaacgtgcacccggcgtaccgctgggctggaagagcgctgcc
gatatcattgcgcttcagccgctgctgcgtcatcccgatttcgtcgtcgcgcgtaaacag
cgccattactggcaagtgcgcgagaaagtgtttgattaccagggacgtttccgccgggcc
aacgaattacgttaa
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