Erwinia rhapontici: LJN55_18475
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Entry
LJN55_18475 CDS
T08392
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
erp
Erwinia rhapontici
Pathway
erp01501
beta-Lactam resistance
erp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJN55_18475
01503 Cationic antimicrobial peptide (CAMP) resistance
LJN55_18475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_18475
01504 Antimicrobial resistance genes [BR:
erp01504
]
LJN55_18475
Transporters [BR:
erp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LJN55_18475
Antimicrobial resistance genes [BR:
erp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LJN55_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UDQ79411
LinkDB
All DBs
Position
complement(4004839..4007967)
Genome browser
AA seq
1042 aa
AA seq
DB search
MSKFFIERPIFAWVIAIVVMLVGGLSILSLPINQYPNIAPPAISVQVAYPGASAETTQNT
VVQVIEQQLNGLDNLRYIESQSNSDGSASIIVTFNQGTDPDIAQVQVQNKVSLAESQLPT
EVVNQGINIRKYQANFMLVVGLTSSNPKLSNGDLADLMVSKLQDPIARSNGVGDFMVMGA
EYGMRIWLDPAKLYKYQLVPSDITTAISQQNVQVSSGKPAGLPTVSGARFSATIVGKTRL
QSVEQFKNILLKVNADGSQVRLRDVGGIDLGPQDYSISSTFNGEPSVGIALRLASGGNVL
DAINSVRHTVDGIKPFLPEGVKVNFPYDTAPVVSASIEEVVKTLIEAIVLVFMVMLLFLQ
NLRATLITTMVVPVVLLGTFGILAACGYTINILTMFGMVLAIGLLVDDAIVVVENVERVM
HDEGLDPKAATIKSMQQIQGALLGIALVLSAVLLPMAFFSGSTGVIYRQFSITIVSAMAL
SVLMAMIFTPALCATLLKATSAEHKTTGMAGWFNRKFDTGTLYYTRGVSRVISKRKLFLV
IYVAIIAATGYLFTRVPTSFLPDEDQGVMMVQVTLPANASSGRTQEVLNDIGGWLLKNEP
EVKSVFSPNGFSFAGRGENVGMSFVLLKPWDQRNSEQSVQKLAARTMAHFATLKDAKVFA
LVPPAVMELGNATGFDFFLQDVNNQGHAALMAARNQFLSMAAKDKRLFATRPNGMEDEPQ
YHLIIDDERARALGLSLEDVNDTLSTAWGSSYVNQFIYNARVKKVYVQGNAGSRVTPEDL
DKWYFRNASGDMVPYSAFGSGKWEYGSPRYERFNGASSVEIMGSPAPGYSSGDAVKAVNE
IAAKLPKGFRVGWHGLSYEEQMSGSQTPALYTISILMVFLCLAALYESWSIPFSVLMVVP
MGVLGTILAVLMRGLENDVFFQVGLLTTVGLAAKNAILIVEFAKDLHENQGKGLMEAAIE
AAKLRIRPIIMTSMAFVLGVLPLTMSHGAGAGSQHSIGTAVVGGMITATFLAIFFVPMFY
VVVAQRFTAKKKPKTEVEEHDA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattttttattgaacgtcccatctttgcctgggtgatcgctattgtggtgatg
ttggtggggggactgtcgattttgagtctgcccatcaaccagtacccgaatattgccccc
ccggcgatttcggtgcaggtagcctatccgggtgcgagcgcagaaacgacgcaaaatacc
gtggtgcaggtcattgaacagcagttgaacgggctggataacctgcgttatatcgaatca
caaagtaacagtgacggcagtgcgtcaatcatcgtcacctttaatcagggcacagacccg
gatattgcccaggtgcaggtgcagaacaaagtgtcgctggctgaatcacaattaccgacc
gaagtggtgaatcaggggatcaacatccgtaagtaccaggccaactttatgctggtggtc
gggctgacgtcgagtaatcccaagctgagtaatggcgatctcgctgacctgatggtgtcg
aaattacaggacccgattgcgcgcagcaacggcgtgggggattttatggtgatgggggcc
gagtacggaatgcgtatctggctcgacccggcaaaactgtataaataccagctggttccc
agcgatatcactacggcgatcagccagcagaacgtgcaggtttccagcggtaaacccgcc
ggattaccgacggtgtcgggcgcaagattcagtgcgactatcgtcgggaaaacccgtctg
cagtcagtggagcagttcaaaaatattctgttaaaggtcaatgctgatggttcacaggtg
cgcctgcgtgacgtgggcggtatcgatcttggcccacaggattacagcatttcctccacc
tttaacggtgaaccgtcggtcggtattgcactgcgccttgccagtggcggtaacgtgctg
gatgcgatcaacagcgtgcgacataccgttgacggcattaaacctttcctgccggaaggg
gtgaaagtcaatttcccgtacgatacagcacccgttgtcagtgcctcgattgaggaagtg
gtgaaaacgctgatcgaagcgattgtgctggtcttcatggtcatgcttttgttcctgcaa
aacctgcgtgccacgctgattaccacgatggtggttccggtggtgctgctgggcacattc
ggtattcttgcggcctgcggttacaccatcaatattctcacgatgtttggaatggtgctg
gccatcgggctgttggtggatgacgctatcgtggtggtggaaaacgtcgaacgtgtgatg
cacgacgaagggctggatccgaaagccgccacgattaagtccatgcagcagattcaagga
gcactactgggaattgcgctggtgctgtcagcggtgctgctgccgatggccttcttcagt
ggttccaccggggttatctatcgccagttctcaatcactattgtctctgcgatggcgctc
tcggtgctgatggcgatgattttcacccctgcactctgcgccacgctgctgaaagcgacc
tctgccgagcataaaaccaccgggatggcgggctggtttaaccgtaaattcgacaccggg
acgctttattacacccgcggcgtgagtcgcgttatttccaaacgaaagctgttcctggtg
atctacgtggccattatcgccgcaacaggttatctgtttacccgcgtacccacctcattc
ctgccggatgaggaccagggggtgatgatggtgcaggtgacgctgcccgccaatgcctcc
agtggacgcacccaggaggtgctgaatgacattggtggctggttgctgaagaacgaacct
gaggttaaatcggtcttctcgccgaatggcttcagttttgccgggcgtggggaaaatgtc
ggcatgtccttcgtgctgttgaaaccctgggaccagcgcaacagcgagcagtcggtgcag
aaactggccgcccgcacgatggcgcacttcgccacactcaaagatgccaaggtgtttgct
ctggtaccgccagccgttatggagctggggaatgcgaccggcttcgacttcttcctgcag
gacgtcaataaccaggggcatgccgcactgatggccgcgcgtaatcaattcctgtcgatg
gcagcgaaagataagcgcctgttcgctacccgtccgaacgggatggaagatgagccgcaa
tatcatctgattattgatgatgaacgtgcgcgggcgctgggcctcagcctggaagatgtt
aacgatacgctctccacggcctggggttcgagctacgtgaaccagtttatctataacgcc
cgcgttaagaaggtctacgtgcagggtaacgcggggtcgcgtgtgacaccggaagacctc
gacaaatggtacttccgtaatgccagtggcgacatggtcccttattccgccttcgggagt
ggcaaatgggaatacggttcaccgcgctatgagcgctttaacggtgcctcatcggtggag
attatgggctcgcctgcgcctgggtatagctcgggtgatgcggtaaaagctgtcaacgag
attgccgccaaactgcccaaagggtttcgtgttggctggcatgggttgtcctacgaggaa
cagatgtccggttcacagactccggcgctgtataccatttccattctgatggtcttcctc
tgccttgccgcactgtatgagagctggtcgatcccattctcggtgctgatggtggtaccg
atgggcgtgttaggcaccattcttgcggtgttgatgcgtggcctggaaaatgacgtcttc
ttccaggtggggctgctgacgactgtcggactggctgccaaaaatgccattctgattgtc
gagtttgccaaagatctgcatgaaaatcagggaaaaggactgatggaagccgcaattgag
gcggcgaaactgcgtatccggccaatcattatgacctcaatggcctttgtgctcggcgtg
ctgccgttgacgatgtctcacggtgccggtgcgggaagccagcactcgatagggactgcc
gtcgtcggcgggatgatcactgcgaccttcctggccatcttcttcgtgccgatgttttac
gttgtggttgcccagcgttttaccgcgaagaaaaaaccgaaaactgaggttgaagaacat
gatgcgtaa
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