Erwinia rhapontici: LJN55_18945
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Entry
LJN55_18945 CDS
T08392
Symbol
mrcB
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
erp
Erwinia rhapontici
Pathway
erp00550
Peptidoglycan biosynthesis
erp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LJN55_18945 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
erp01003
]
LJN55_18945 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
erp01011
]
LJN55_18945 (mrcB)
Enzymes [BR:
erp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LJN55_18945 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LJN55_18945 (mrcB)
Glycosyltransferases [BR:
erp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LJN55_18945 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
erp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LJN55_18945 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
TFIIA
Homeobox_KN
Gag_p17
Motif
Other DBs
NCBI-ProteinID:
UDQ79495
LinkDB
All DBs
Position
complement(4107996..4110545)
Genome browser
AA seq
849 aa
AA seq
DB search
MSDDREPIGRKGKQPQPARNKAGRGRRREEEYDDYDDQDDEDLDEEEVTSMPRKGKGRGT
RKKRGWIGLLFKLFLIFAVVMAIYGFYLDSQIRSRIDGKVWQLPATVYGRMVSLEPGMSY
SKKEMITLLEGTQYREVTRMTRPGEFTVQANSIEMIRRPFDFPDSKEGQIRARLSFSGDR
LSDIKNLDNGRSFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLVATEDRHFYQ
HDGISLYSIGRAFVANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDA
RYSKDRILELYLNEVYLGQAGNDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGASL
YNPWRNPQLSLERRNLVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVITPQPAFMQMVR
NELQSKLGDKVKDLSGVKIFTTLDSVSQDAAEKSVEEGIPALRKQRGVNDLEAAMVVVDR
FSGEVRAMVGGADPQFAGYNRALQARRSIGSLAKPATYLTALSQPDTYRLNTWLADNPIA
LKQPNGQVWKPQNDDRRYSGQVMLVDALTNSMNVPTVNLGMTLGLPQVVDTWTKLGVPKD
QLNPVPAMLLGALNLTPIEVAQAFQTIASGGSRAPLSAVRSVIAEDGSVLYQSFPQAERA
VPAQGAYLTLYSMQQVVDHGTARALGAKYPKATLAGKTGTTNNQVDTWFAGIDGKEVAIT
WVGRDNNQPTKLYGSSGAMQLYRRYLEMQAPMPLTLTPPEDIALMNVDSAGNFVCGSASS
SWRSLPVWTTDANALCQQQQQQVQQQQQMLQQQNQQQNQQQNQQQGQQPQNQQKDGDGVA
GWIKDMFGQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatcgcgaacctatcgggcgtaaaggaaaacagccccagcctgcgcgcaac
aaagcggggcgtggtcgccgcagggaagaagaatatgatgactatgacgatcaggatgat
gaagatctggatgaggaagaggtaacttcgatgccacgtaaaggaaaagggcgcgggacg
cgtaagaaaagaggctggataggcttattgtttaagcttttcctgatcttcgcggtggtc
atggccatttatggtttctacctcgattcacagatccgcagccgtattgatggcaaagtc
tggcagctaccggccacggtgtatggccgcatggtcagccttgagccaggcatgtcgtac
agtaaaaaagagatgatcacgctgctggaaggcacacagtatcgcgaagtgacgcgcatg
acgcgccccggcgaatttaccgtgcaggccaacagcattgagatgatccgtcgcccgttt
gatttccccgacagcaaagaggggcagatccgcgcacgtctgagcttcagtggcgatcgg
ctgagcgatattaagaacctcgacaatggacgcagcttcggcttcttccgcctcgacccg
cgtctgatcaccatgttgcagtcgcctaacggcgaacagcgcctgtttgtaccacgcgcc
gggttcccggacctgttggtggatacgctggtggcgaccgaagaccgtcatttctatcag
catgatggcatcagcctctattcgattggccgtgcttttgtcgccaacatcactgccgga
cgtgcagtgcagggcggaagtacgctgacccagcagctggtgaagaacttgttcctcacc
aacgaacgctcgctgtggcgtaaagccaacgaagcctatatggcgctgatcatggatgcg
cgctacagcaaagaccgcattctggagctgtacctcaatgaggtgtatctcggccaggca
ggcaacgatcagatccgtggcttcccgctggccagcctgtattactttggccgtcccgtg
gatgagctgagccttgaccagcaggcactgctggtgggcatggtgaaaggcgcatcgctg
tataacccgtggcgcaacccgcagttgtcactggagcgtcgtaacctggtgttgcgcctg
ttgcagcagcagaaggtgatcgaccaggagctttacgacatgctgagtgcgcgtccgctg
ggcgtgcagccgaaaggcggcgtgatcaccccacagccagcgtttatgcagatggtgcgt
aacgagttgcagagcaaactcggcgataaggtgaaggatctctccggggtgaaaattttc
accacgctggattcggtgtcgcaggatgctgctgagaagtcagtagaagaggggatcccg
gcgctgcgtaaacagcgtggggtcaacgatctggaagcggcgatggtggtggtggaccgc
ttcagcggtgaagtgcgcgccatggtcggtggtgccgatccacagttcgcgggctacaac
cgtgccttgcaggcgcgtcgttcgattggttcactggcaaaaccggcgacctatctgacc
gcgctgagccagccggatacctaccgtctgaatacctggctcgcggataatccgattgcg
ctgaaacagcctaacggccaggtgtggaaaccgcagaacgacgaccgtcgttacagcggc
caggtgatgctggtggatgcactgaccaactccatgaacgtgccgacggtgaacctgggg
atgacgctcggtctgccgcaggtggtggatacctggaccaagctgggtgtaccgaaagat
cagctgaatccggtgccggcgatgttactgggtgcactgaacctgacaccgattgaagtg
gcacaggctttccagactatcgccagcggcggcagccgtgcgccgctgtcggccgtacgt
tccgtgattgctgaagatggtagcgtgctgtatcagagcttcccgcaggccgaacgtgcc
gttccggcgcagggggcttacctgacgctctacagcatgcagcaggtggtggatcacggt
acggcgcgtgcgcttggggctaagtatccgaaagcgacgctggcaggcaaaaccggcacc
accaacaatcaggtagatacctggtttgccgggatcgatggcaaagaagtcgccatcacc
tgggtgggtcgtgataacaaccagccgaccaaactgtatggttccagcggggcgatgcag
ctgtatcgtcgttatctggaaatgcaggcgccgatgccgttaactctcacgccaccagaa
gatattgcactgatgaacgtcgattctgccggtaactttgtctgcggtagtgccagcagc
agctggcgtagcctgccggtctggaccacggatgctaacgccctgtgccagcagcaacag
cagcaggttcagcagcagcaacagatgttgcagcagcagaatcaacagcagaatcagcaa
cagaatcagcaacaagggcagcaaccgcagaatcagcaaaaggatggcgatggtgtggct
ggttggatcaaagatatgtttggtcagtag
DBGET
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