Escherichia ruysiae: OSH18_05820
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Entry
OSH18_05820 CDS
T09019
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
eruy
Escherichia ruysiae
Pathway
eruy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OSH18_05820 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eruy03400
]
OSH18_05820 (uvrB)
DNA repair and recombination proteins [BR:
eruy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSH18_05820 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OSH18_05820 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
Helicase_C_2
IF2_N
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
WGM53659
LinkDB
All DBs
Position
complement(1199496..1201517)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGQIISTIAR
YTIYPKTHYVTPRERIVQAMEEIKEELADRRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKARAIVEPDNVPMDMSPKALQQKIHELEGQMMKHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccattcaaactgaattccgcgtttaaaccttctggcgatcagccggaggcg
attcgacgcctcaaagaggggctggaggatggcctcgcgcatcagactctgcttggcgtg
acggggtcggggaaaaccttcactattgctaatgtcatcgctgacctgcaacgcccaacc
atggtgctggcgcccaacaaaacgctggcagcgcaactatatggtgagatgaaagagttc
ttcccggaaaacgcggtggagtatttcgtctcctattacgattactatcagccagaagcc
tatgttccgagttcagatacgtttattgagaaagatgcctcagtaaacgaacatatcgaa
cagatgcgactttcagcaaccaaagcgttgctggagcggcgagatgttattgtcgtagcg
tcagtttccgcaatttatggtctgggcgatcctgatttatatctcaagatgatgctgcac
ctcacggtcggtatgattatcgatcagcgcgcgatcctgcgtcgcctggcggagttgcaa
tacacccgcaacgaccaggcattccagcgcggcacttttcgcgtgcggggtgaggtgatc
gacatcttcccggcagagtccgacgacgttgcgctacgtgtagaattgttcgacgaagaa
gtggaacgtctctcgcttttcgacccactaaccgggcagattatctcgaccattgcgcgt
tataccatctacccgaaaacgcactatgttacgccgcgcgagcgcattgtgcaggcgatg
gaagagattaaagaagaactggcggatcggcgcaaggtactgctggcaaataacaagttg
ctggaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaatgagctg
ggatattgctcgggcatcgaaaactattctcgctttctttccgggcgtgggcctggcgag
ccaccgccgacgctgtttgattacctgcctgccgatgggctgctggtggttgatgaatca
cacgtcaccattccgcagataggcggtatgtatcgcggcgaccgggcgcgtaaagaaacg
ctggtggagtatggtttccgcctgccatcggcgctggataaccgtccgctgaagtttgaa
gagttcgaagcattagccccgcaaaccatctatgtttccgcgacgcccggcaactatgaa
ctggagaaatccggcggcgacgtggtggatcaggtggtgcgtccaaccggattgcttgat
ccgattatcgaagtgcgtccggtcgcgacccaggtcgatgatcttctttcagaaattcgc
ctgcgggcggcaattaacgaacgcgttctggtgacgacgctgaccaagcggatggcggaa
gacctcaccgaatatctcgaagaacacggcgagcgcgtgcgttatcttcactccgacatt
gataccgttgaacgtatggaaatcatccgcgacttgcgtctgggcgagttcgatgtgctg
gttggcatcaacttactgcgcgaaggtctggatatgccggaagtgtcgctggtggcaatc
ctcgacgccgacaaagagggcttcctgcgttctgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgttaacggtaaagcgattctctacggcgataagataaccccgtca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgaa
gagcatggcattacaccacaagggctgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgctaaaaccaaagccaagggcagagggaaagcgcgcgcgattgttgagccg
gataatgtgccgatggatatgtcgccaaaagcgttgcagcagaaaatccatgaactggaa
gggcagatgatgaaacacgcacaaaacctggagttcgaagaggcggcgcaaattcgtgac
cagttgcatcagttgcgtgagctgtttattgcggcttcgtga
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integrated database retrieval system
