Escherichia ruysiae: OSH18_20360
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Entry
OSH18_20360 CDS
T09019
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eruy03400
]
OSH18_20360
DNA repair and recombination proteins [BR:
eruy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
OSH18_20360
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
UPF0547
AAA_16
SLFN-g3_helicase
zf-tcix
AAA_22
zinc_ribbon_2
zf-ribbon_3
AAA
TerL_ATPase
DZR
Motif
Other DBs
NCBI-ProteinID:
WGM52512
LinkDB
All DBs
Position
complement(4281688..4283448)
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AA seq
586 aa
AA seq
DB search
MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGPPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacttcgcccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaacccctgccgttatcgtgctgcccaccggcgcaggtaaaagcctggtg
atagcggaactggcacggctggctcgtggtcgcgtactggtgctggcacacgttaaagaa
ctggtggcgcaaaaccatgcaaagtatcaggcgctggggctggaagccgatatttttgcc
gccgggctaaagcgcaaagagagccacggtaaagtggtgtttggcagtgtgcagtcggtc
gcacgcaatctcgatgcctttcagggtgaattttcgctgttgattgtcgatgaatgccac
cgcattggcgacgatgaagagagccagtatcagcaaatccttactcacctgacaaaagtg
aatccccacttacgcctgttggggctgaccgccacgccttttcggctgggcaaaggctgg
atctatcagttccattatcacggcatggtacgtggcgacgagaaagcccttttccgtgac
tgcatttatgagctgccgctgcgttatatgattaaacacggctatctgacgccaccagaa
cggcttgatatgccggtagtgcaatacgatttcagccgcttgcaggcacagagtaacggg
ctgttcagcgaagccgatctcaaccgcgagctgaaaaaacaacaacgtattacgccgcac
atcatcagccagattatggagttcgccgcaacgcgcaaaggggtgatgattttcgccgcg
acggttgaacacgcaaaagagattgtgggattgctgcccgccgaagatgcagcactcatt
accggtgacacacccggcgctgaacgtgatgtattaattgaagattttaaagcccagcgt
tttcgctatctggtcaacgttgcggtactgaccaccggatttgacgccccgcacgtcgat
cttatcgccatcctgcgccctactgaatcagtgagtctttaccaacaaattgtcggacgc
ggtctgcgtctggcgcccggcaagactgattgcttaattcttgattatgcgggtaatcct
cacgatctctacgcgccagaagttggccccccaaaaggcaaaagtgacaacgttccggta
caggttttctgccctgcctgcggctttgccaacaccttctggggcaaaacgaccgccgac
ggtacattgattgaacactttggtcgtcgctgtcaggggtggtttgaagatgacgacggt
catcgcgaacagtgtgacttccgtttccgttttaaaaattgcccgcaatgtaacgcggaa
aacgatattgccgcccgacgatgccgcgaatgtgacacggtactggttgatccagacgac
atgttaaaagcggcgctacgactcaaagacgcgctggtattacgctgtagcggcatgtct
ttgcagcatggtcacgacgagaaaggcgaatggctgaaaatcacctattacgatgaagac
ggcgcggatgtgagtgagcgtttccgtctacaaacgcccgcccagcgtaccgccttcgaa
caactttttatccgcccgcatacgcgcacaccgggcatccctctgcgctggataaccgcc
gccgatatcctcgcccagcaagccttattgcgccatccggattttgttgttgcccgcatg
aaaggtcagtactggcaagtgcgtgaaaaagtgttcgattacgaaggtcgttttcgtcgg
gcgcatgaattacgcggttaa
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