Aurantiacibacter atlanticus: CP97_09005
Help
Entry
CP97_09005 CDS
T03997
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ery
Aurantiacibacter atlanticus
Pathway
ery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP97_09005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ery03019
]
CP97_09005
Enzymes [BR:
ery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CP97_09005
Messenger RNA biogenesis [BR:
ery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP97_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AKQ42126
UniProt:
A0A0H4VGY6
LinkDB
All DBs
Position
1845652..1847028
Genome browser
AA seq
458 aa
AA seq
DB search
MTIQFKDLELSQPVLQALDMKGYNEPTPIQAQAIPAVLQGRDLLGIAQTGTGKTAAFMLP
SIDNLRKADNQIPFKSCRMLVLAPTRELAGQIAESAKDYGALAGLKVHSIVGGTSVGKDR
NKLHRGTDILVATPGRLLDLIDQKAFNLSGVEILVLDEADQMLDLGFIHALRRISELVPA
ERQTLFFSATMPKQIKELVGKYCNNPATVSVTPAATTAERIDQYLFMVQQDEKQALLELI
LSGRHEVPGKFERVLIFTRTKHGADRLVKKLAQANIGANAIHGNKSQPQRVRALDEFKRA
KTPVLIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGADGIAIAFCAEDER
AYLKDIRKVTDANFDRLPLPENFRAVVEGVGPTKPAPKQQQQRVKPKPRAGSGGHSRHAD
RKGRPQGDRGGQGGQSGGQGRRSGGQRQRGGNRGRSQA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactattcaattcaaagacctcgagctgtcgcagcccgttcttcaggcgcttgacatg
aagggctataatgagccgacgcccatccaggcgcaggccattccggctgtactccaaggt
cgagaccttctgggtatcgcgcagaccggcaccggaaaaacagccgctttcatgcttccc
agcatcgataatttgcgtaaggccgacaatcagatcccgttcaaatcctgccgtatgctg
gtgcttgcaccaacgcgtgagctggctggacagattgccgaatccgcaaaggattatggt
gcgctggcgggcctcaaggttcattccatcgtgggcggcacgtctgtcggcaaggatcgt
aacaagctgcaccgcgggaccgacattcttgtggctacgccgggccgcctgctcgatctg
atcgaccagaaggcattcaacctttccggcgttgaaatattggtgctggacgaggcggat
cagatgctcgacctcggcttcatccatgctctgcgccgtatcagcgagcttgtgcccgca
gaacgccagacgctgtttttcagcgccaccatgcccaagcagatcaaggaactggtcggc
aaatattgcaacaatccggccactgtatcggtaacgcccgctgccacaacggcagagcgg
atcgaccagtatctgttcatggtccagcaggatgaaaagcaggcgctgctcgaactgatc
ctgtccggccgccatgaagtgcctggcaagtttgaacgcgtgttgatttttacacgtacc
aaacacggtgcagacaggctggtaaagaaactggcgcaggccaatatcggtgccaatgcc
attcacggcaacaagagccaaccgcagcgtgtgcgcgccctggatgaattcaagcgggca
aagacgcctgttctgatcgctaccgatgtggccgcgcgcgggatcgatatccccggggtc
agccacgtgatcaattatgaattgcccaatgtgccggaacaatatgtccatcgcattggc
cgcaccgcgcgtgcaggcgcggacggtatcgcaattgcgttttgtgccgaggacgaacgg
gcatatctgaaggacatccgcaaggtgaccgacgccaatttcgatcgtctgccactgccg
gaaaacttccgcgccgttgtggaaggtgtcgggccgacaaagcctgctcccaagcagcaa
caacagcgcgtgaagcccaagccccgcgccggttctggtggtcactcgcgccatgctgat
cgcaaggggcgcccgcaaggtgaccgcggtggccagggcggccagagcgggggccagggc
cgacgttctggtggtcagcgccagcgtggcggtaatcgtggccgctcacaggcctga
DBGET
integrated database retrieval system
