KEGG   Exiguobacterium sibiricum: Exig_0088
Entry
Exig_0088         CDS       T00687                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
esi  Exiguobacterium sibiricum
Pathway
esi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:esi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Exig_0088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:esi03021]
    Exig_0088
   03400 DNA repair and recombination proteins [BR:esi03400]
    Exig_0088
Enzymes [BR:esi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Exig_0088
Transcription machinery [BR:esi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Exig_0088
DNA repair and recombination proteins [BR:esi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Exig_0088
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45
Other DBs
NCBI-ProteinID: ACB59575
UniProt: B1YGU2
LinkDB
Position
112308..115865
AA seq 1185 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTNSYEWFLREGLREMFHDISPISDFTG
NLVLEFIDYSLGEPKYSIDESKERDVTYSAPLRVKVRLQNKETGELKEQEVFMGDFPLMT
ESGTFIINGAERVIVSQLVRSPSVYYNNKLDKNGKRGFSATVIPNRGAWLELETDAKDIV
YVRIDRTRKIPVTVLLRALGFGTDQEIIDLLGDDEYLRNSLEKDNTETTEKALIEIYERL
RPGEPPTVENAKALLVSRFFDPKRYDLANVGRCKINKKLHLKNRLFGQKLAETLVDPETG
EVIAEEGTVLDRRMLDKVLPFLEGSVGYIEATPTGGVTQGEAFNLQSIKVFAPDDAEGER
IINIIGNGNIDRDIKHITPADMIAAINYFFNLLHEVGTTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVKERMSIQDQNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAE
LTHKRRLSALGPGGLTRERAGFEVRDVHYSHYSRMCPIETPEGPNIGLINSLSSFAKVNE
YGFIEAPYRRVDPETGVVTNEIHYMTADEEDLYVVAQANMLLTEEKTFQDTHVLSRFRGQ
NLSVEPARVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLDPESPIVG
TGMEYVSAKDSGAAVVAKHSGIAERVTAREILVRRTTEVDGNIVQGELDRYKIQKFIRSN
QGTCYNQKPIIKVGDPVDKGEILADGPSMDGGELALGRNVLVGFMTWDGYNYEDAVIMSE
RLVKDDVYTSIHIEEYECESRDTKLGPEEITRDIPNVGDDALKNLDDRGIIRVGAEVKDG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGDGIILDVKIFDRDNGD
ELSPGVNQLIRAYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYMPDGTPIDIMLNP
LGVPSRMNIGQLLELHLGMAARQLGIKVASPVFDGAREEDVWATIEEAGMDRDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDTIGRVKAYEAIVKGENVPQPGVPESFRVLIKELQSLG
MDVKMMSAEDEEIEMKDDDEDNIPNATPALEEVQAPVAPVVTEEE
NT seq 3558 nt   +upstreamnt  +downstreamnt
ttgactggtcaacttgttcagtacggtcgtcaccgtcagagaagaagctatgcacgtatc
agcgaagttctagaacttccaaaccttattgagattcaaacgaattcatacgaatggttc
ttgcgggaaggtcttcgtgagatgtttcatgatatctcgccgatttctgactttacggga
aatctcgtattagaattcatcgactactcgctcggagagccgaagtattcgattgatgaa
tcaaaagagcgcgatgtgacctattcggcaccactacgcgtaaaagtccgtcttcaaaac
aaagagacgggtgaattgaaggaacaagaagtatttatgggtgacttcccgcttatgacg
gagtcgggaacattcattattaatggtgcggaacgagttatcgtttcccagcttgttcgt
tcgccaagtgtgtattacaacaataagttagataaaaacggtaaacgtggattttcggca
acggtcatcccgaaccgtggagcatggctcgaacttgagacagatgcgaaagatatcgta
tacgtccgaatcgaccgcacgcgtaagattccagtaacggttcttttacgtgctcttggt
ttcggtacggatcaggaaatcatcgatctccttggagatgatgagtacctccgtaactcc
cttgaaaaagataatacagaaacaacggaaaaagccctcatcgagatttatgagcgtctg
cgtccgggagagccaccgactgtcgaaaatgcgaaagcacttctcgtgtcacggttcttt
gacccgaaacgttatgatttggcaaacgttggtcgttgtaaaatcaataagaagcttcat
ctgaagaatcgtctgttcgggcaaaaactggcggaaacgcttgtcgatccggaaacaggc
gaagtaatcgcagaagaaggaacagttcttgaccgtcgtatgctcgacaaagtcttgcca
ttccttgaaggatctgtcggttacatcgaagcgacgccaactggcggagtaacgcaaggc
gaagccttcaacttacaatcgatcaaggtgttcgcaccggacgatgctgaaggtgaacgc
atcatcaatatcatcggtaacggtaacatcgatcgtgacatcaagcacatcacgcctgct
gacatgattgctgcgatcaactatttcttcaacttgttgcatgaagtaggaacgacagac
gatatcgaccacctcggtaaccgtcgtctccgttcagtcggtgaattgctccaaaaccag
ttccggatcgggctttcccgtatggagcgtgtcgttaaggagcgaatgtcgattcaagac
cagaatgcgatcacgccgcaggcattgatcaacattcgtcctgttatcgcatcgattaaa
gagttcttcggtagctcgcaattatcacagttcatggaccaaacgaacccgcttgctgag
ttgacgcacaaacgtcgtctatctgcactcggacccggtggtcttacacgtgagcgcgct
ggctttgaagttcgagatgttcactactcgcactattcccgtatgtgtccaatcgaaacg
ccggagggtccgaacatcgggctgatcaactcactgtcttcgttcgcgaaagtcaatgag
tatggtttcatcgaagcgccataccgtcgtgtcgatccggaaacgggtgtcgtcacgaat
gaaattcactacatgacggccgacgaagaggatctctacgtcgtcgcacaggcaaacatg
ttgttgacggaagagaagacgttccaagatacacacgtcttgtcacgtttccgcggacaa
aacttgtctgtcgaaccagctcgtgtcgattacatggacgtttcaccgaaacaggttgtt
tcggcagcgacggcatgtatcccgttcttagagaacgatgactcgaaccgtgccctcatg
ggagcgaacatgcaacgtcaggccgtacctcttcttgatccggaatcaccaatcgttggt
accggtatggagtacgtgtctgcaaaagactcaggggctgccgttgttgcaaaacattca
ggtatcgctgagcgtgtaacggcacgtgaaatccttgtccgtcgtacgacggaagtcgat
ggcaacatcgttcaaggtgagcttgaccgctacaagatccaaaaattcatccgttctaac
caaggaacgtgctataaccaaaaaccaatcatcaaagtaggagatcctgtcgataaaggc
gagatccttgcagatggtccatcgatggacggtggggaacttgcgcttggtcgtaacgta
ctcgtcggtttcatgacatgggatggttacaactacgaggatgctgtcatcatgagcgaa
cgtctcgtgaaagacgacgtctacacgtcgatccacattgaagagtatgagtgtgaatca
cgtgatacaaaactcggaccggaagagatcacgcgtgacattccgaacgtcggcgacgac
gccctgaaaaacctcgacgaccgcggaatcatccgtgtcggtgctgaagtaaaagacggg
gatatcctagtcggtaaagttacacctaagggcgtaacggaattgacggctgaagaacgc
ctgcttcatgcaatcttcggtgaaaaagcacgtgaagtccgtgatacgtcacttcgtgtt
ccacacggcggcgacggcatcatccttgacgtgaaaatcttcgatcgtgataacggcgac
gagctgtcacctggtgtcaaccagttgatccgtgcgtacatcgttcagaagcgtaagatt
cacgaaggagataaaatggctggacgtcacggtaacaaaggtgttatctcacgtatcctg
ccagaagaagacatgccgtacatgccagacggcacaccaatcgacatcatgttgaaccca
cttggtgtaccatcgcggatgaacatcgggcagttgctcgagcttcaccttggtatggct
gcacgccaactcggaatcaaagtcgcatcaccggtattcgatggtgcacgtgaggaagat
gtttgggcaacgattgaagaagccggtatggaccgcgacgctaaaacgatcctgtatgat
ggacgttctggtgaagccttcgataaccgcatctcggttggtgtcatgtatatgatcaaa
ctcgcccacatggtcgatgataaacttcacgcacgttcgacgggtccttactcgctcgtt
acgcagcagccgctaggtggtaaagcccagttcggtggacagcgtttcggtgagatggaa
gtatgggcacttgaagcatacggtgccgcttatacgctccaagagatcctgacaattaaa
tccgatgatacaatcggtcgtgttaaagcatatgaagcgatcgttaaaggcgaaaatgta
ccacaaccgggcgtgccggaatcgttccgagtcctcattaaagagcttcaatcccttggt
atggatgttaagatgatgtctgccgaagatgaagagatcgaaatgaaagacgacgacgag
gacaacatcccgaacgcgactccagcactcgaagaagttcaagcgcctgtcgcaccagtt
gttactgaagaggaataa

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