Eriocheir sinensis (Chinese mitten crab): 126997590
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Entry
126997590 CDS
T08870
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03013
Nucleocytoplasmic transport
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126997590
09122 Translation
03013 Nucleocytoplasmic transport
126997590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126997590
03041 Spliceosome [BR:
esn03041
]
126997590
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126997590
Spliceosome [BR:
esn03041
]
Complex C
Other components
EJC/TREX
126997590
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126997590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
126997590
NCBI-ProteinID:
XP_050714719
LinkDB
All DBs
Position
12:20500083..20509520
Genome browser
AA seq
705 aa
AA seq
DB search
MAADSSLTFQRIFTRVQATLPQCIEGVDSLPVTSIFSTRISETTKHCIEAAIRSYVTRKV
IDGDKTDLTTITAITTICIDLVRHELSLPTLPVLVLSDAFDTLTISQGEQLFAFVESHVG
VWKEDTFFAPCKTSVLRMCNDLLRRLSRSQNTVFCGRILLFLARFFPFSERSGLNLVSEF
NLENVTTFTNVEASEMEDDEEEDKGGTTPRLDYTLYTKFWSLQDFFRNPAQCFQKAPWKV
FTLYCGDVLEAFKSFKLDHLQGSSGGAGARLSRSLSEPAPDQEAAAGDSIASEHQVDQYF
AKYLTNQKLLDLQFSDTNFRRYVLLQVLILAQYLTSNIKFKQETLTEDQLAWVRKTEKLV
YSLLEETPPDGPKFVSTVKHILKREEMWSNWKNDGCPEFKKPESGKNSVGGAGNSTGKQN
GKSEEGALQVGKEDGETQHSPRKVRQKRKVGDLIKEADSRGKFTMGNAEMTRLWNLHPNN
LEACKISERDFVPALETYFTPAIEQLSPKADLKEEKKLVNDSNFGWRALRLLACRSPHFF
TNSASPIAKLPEYLNTMIKKLAKELPSQLVADIRVEEEEEKEEEKVIPVLEQGEGVKEEE
DMEEETGDVEERPEVCAITEDEQLALARHLDTLGGDKWKVLAKKLGFQTDEIEFIEKDKS
ESITEQAAFMFKLWVDGEGDEANKESLLYTLEGLEMQEVGQGVFT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggactcgagcctcaccttccagcggattttcacgagggttcaggccacgctg
ccgcagtgcatcgagggcgtggactccctgcccgtcacctccatcttctccaccaggatc
agtgagacaaccaagcactgcattgaggctgccatccgaagctacgtgacgaggaaggtg
atcgacggagacaagaccgatctgaccaccatcaccgccatcaccacaatttgcattgat
cttgtgaggcatgagctgagtctaccaaccttgccagtgctggtgctaagcgatgccttc
gacaccctcaccatcagccagggggaacagctctttgccttcgttgagagccacgttggc
gtctggaaggaggacacgttcttcgccccgtgcaagaccagcgtgctgcggatgtgcaat
gacttgctacgacgcctctcgcgctcccaaaacaccgtcttctgtggccgcatcctgctc
ttcctagcacggttctttcccttctcggagcgttcggggctcaacctcgtctctgagttc
aaccttgagaatgtgacgaccttcacaaatgtagaggcgtcggaaatggaggatgatgag
gaggaggataaggggggcaccacaccacgcctggactacactctgtacaccaagttctgg
tcgctgcaggacttcttcaggaaccccgcacagtgtttccagaaggcaccatggaaggtc
ttcactctgtactgtggtgacgtgctggaggccttcaagagcttcaagttggatcacctt
caaggtagcagtggcggggcgggagccagactctctcgttccctttctgagcctgcgccg
gatcaggaggcagcggcaggagattcaatagcctctgaacaccaggttgaccagtacttc
gccaaatacctcaccaaccagaagcttctcgacctccagttctcagacaccaacttccgg
cgctatgtcctactgcaggtgctgatcctggcccagtacctcacctccaacatcaagttc
aagcaggagacgctgacagaggaccagctggcgtgggtgaggaagactgagaagcttgtt
tactcgctgctggaggagacgccgccggacggacccaagtttgtctccaccgtcaagcat
attttaaagagggaggagatgtggagcaactggaagaacgatggttgtcctgaattcaag
aaacccgagagtgggaaaaacagcgtcggtggagcaggcaacagtaccgggaagcagaac
ggcaagagtgaggagggggcattacaggtggggaaggaggacggggagacgcagcattcc
ccaaggaaggtgcgtcagaagaggaaggtgggtgacctgatcaaagaagcagactccagg
gggaagttcaccatgggcaatgcggagatgacgaggctgtggaaccttcaccccaacaac
ctggaggcgtgcaagatcagtgagcgtgacttcgttcctgccctcgagacgtacttcacg
ccagccatcgagcagctgagccccaaggcggacctgaaggaggaaaagaagttggtgaac
gacagcaactttgggtggcgggcgctgcgtctcctggcctgccgctcaccacacttcttc
accaactcggctagtcccatcgcaaagctgcctgagtacctcaacaccatgatcaagaag
ctggccaaggagttaccgtcccagttggtggcagacatcagggtagaggaggaggaagaa
aaggaggaggagaaggtgatcccagtgctggagcaaggcgagggggttaaggaggaggag
gatatggaggaggagacgggggatgtggaggagcggccagaggtatgcgctatcaccgag
gatgagcagctagcccttgccaggcacctcgacactctggggggagacaagtggaaggtg
ttggccaaaaaactcgggtttcaaactgatgagattgagttcattgaaaaggataaatcc
gaaagtatcactgagcaggcagccttcatgttcaagctctgggtggatggggagggggat
gaggccaacaaggaatcgctgctgtacacgctggaggggctcgagatgcaggaggtgggc
cagggagtcttcacgtga
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integrated database retrieval system
