Etheostoma spectabile (orangethroat darter): 116671714
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Entry
116671714 CDS
T08457
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116671714 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671714 (vti1a)
Membrane trafficking [BR:
esp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
116671714 (vti1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
BPS1
Sec8_N
Laminin_II
DUF1664
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
116671714
NCBI-ProteinID:
XP_032359011
LinkDB
All DBs
Position
21:17254744..17371923
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AA seq
224 aa
AA seq
DB search
MSSDFESYEQDFGTITAEVTNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNGRLKSYKQEIDKLEKDFKRSRIAYSDEVRNELLGDDAGSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILSNLHSDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFILGAIILLTIILAIYFNVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaatcctacgagcaggactttggaacgattacagcagaagtaacc
aacaaaattggcaggattcccaaacttagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagatccccatccagagccgtgccatgtacaacggcagactgaagagctacaaacaagag
atagacaagcttgagaaagactttaaaaggtcacgtattgcctacagtgatgaggtgcgc
aacgagctcctgggggatgacgccggctcctcggagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagccgtagaaactgaacaagtgggtcaggagattctttccaacctg
cacagtgaccgtgagaagatccaaagagccagagaaaggctgagagaaacggacgccaac
ctgggcaagagttctcgcatccttaccggcatgctgagaaggatcatccagaatcgtgtc
ctggtcttcatcctcggagccatcatccttctcaccatcatcctggcaatctatttcaat
gtgcggggccactga
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