Etheostoma spectabile (orangethroat darter): 116675550
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Entry
116675550 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116675550
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116675550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
zf-RING_6
zf-RING_10
DUF5621
Gp58
zf-RING_11
WDCP
Mt_ATP-synt_D
DUF445
Motif
Other DBs
NCBI-GeneID:
116675550
NCBI-ProteinID:
XP_032363167
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MAQRGVQLDRETFSCSICLDLLKDPVTTPCGHSYCMNCIKSHWDGEDGKYSYSCPQCRKT
FTPRPVLLKNTMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAIKSCLQCL
ASYCQKHLQPHFESPAFKKHKLVEPSKKLQENFCFRHDEVMKMFCRTDQQRICYLCSVEE
HKGHDTVSAAAERAERQRIQDREKDVKLFQQQAEAINLSADEAVEDSEKIFTELIRLLEK
RSSDVKQQVRSQQEREVSRVRELQEKLEQEITELKRKDAELKKLSHTEDHNQFLHNYPSL
APLSQSASSIQIRPLSCFEDVTAAVSELRDQLQDVLREKRTNISLTGTEVDVLLPQPEPK
TRAGFLQYSHEITLDRNTAYTYLLLSEGNRKATVMKQQQSYSRNQDKFTDMCQVLSRESL
TGRCYWEVEMNGRVFVAVAYKKISRAGGYQCGFGRNDKSWALDCKNNSYTFWSNDVQTPV
PGPWSSRVGVYLDHSAGILSFYSVSKTMTLLHRVQTTFTQPLYAGLRLYSFRVSAELCKL
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaaa
agccactgggatggagaggatggtaagtacagctacagctgtcctcagtgcaggaagacg
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggaggaaactcaaagccatcaagtcctgtctgcaatgtctg
gcttcttactgtcagaaacaccttcagcctcattttgaatcccctgctttcaagaaacac
aagctggtggagccgtccaagaagctccaggagaacttctgctttcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagcgtatctgttatctctgctctgtggaggaa
cataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagaatccag
gacagagagaaagatgtgaagctgtttcaacagcaggcggaggccatcaatctctctgct
gatgaagcagtggaggacagcgagaagatcttcactgagctgatccgtctcctggagaaa
agaagctctgatgtgaagcagcaggtcagatcccagcaggaaagggaagtgagtcgagtc
cgagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgag
ctgaagaagctctcacacacagaggaccacaaccagtttctacacaactacccctcactg
gcaccactcagccaatcagcatccagcatccagatccgtcctctgagctgctttgaggac
gtgacagcggccgtgtcagagctcagagatcaactacaggacgtcctgagagagaagagg
acaaacatctcactgacagggactgaagtggacgttttactgcctcaaccagagcccaag
accagagctggattcttacaatattcacatgaaatcacactggatcgaaacacagcatac
acatatctgctattgtctgaggggaacaggaaagcaacagtaatgaaacaacaacagtct
tattctagaaaccaagataaattcactgacatgtgtcaggtcctgagtagagagagtctg
actggacgttgttactgggaggtggagatgaacgggagagtttttgtagcagttgcatac
aagaaaatcagcagagcggggggatatcaatgtggatttggacgaaatgacaaatcttgg
gcgttagattgtaaaaacaacagttatacattttggtccaatgatgtccaaactcccgtc
ccaggtccttggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtcc
ttctacagcgtctctaaaaccatgactctcctccacagagtccagaccacgttcactcag
cccctctatgctggactaaggctttatagttttagagtctctgctgagttgtgtaaactg
aagtga
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integrated database retrieval system
