Etheostoma spectabile (orangethroat darter): 116687631
Help
Entry
116687631 CDS
T08457
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116687631 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116687631 (usp47)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116687631 (usp47)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116687631 (usp47)
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116687631 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116687631
NCBI-ProteinID:
XP_032369039
LinkDB
All DBs
Position
1:7145134..7166866
Genome browser
AA seq
1366 aa
AA seq
DB search
MEMVPSQENQFVPKEIQNAAEEPRVLCIIQDITSAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYVKATFDLAWGNSPDMVPLDHSSEMPLSDSGFEPGGKRNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERIIGPLPRDGTAGCSGDYSSPSYSYSSILNKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEETEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHLPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPDELDMSPFMDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVLKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSYSDGQWYSFNDQHVSKITQDDIRKTHGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAAEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLKEATEMAYKLMELEDLVSLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRKPEQAFQPYKPGEVMVKVHVVDLKSENIASPVSVRAYLN
QTITEFKQLIAQATGLSAESMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSES
TDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLCQNVGGDCDVPLEGSKGN
RKSVEAILEESTEKLKNLSLQQQQQQQGSSPSDSQKSSETSDFEHIESPTQEDSNSSLCV
AADNRELENRIRATAGGSSSASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSD
TLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEA
QYLYFRSEPFSQDDSSSEAQKCLVVHVDKRITLAAFKQNLEPYVGVTSTQFKVFRVYANN
QEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAKG
MTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVF
LEVLNEPEKMKSMSQLAVLTRRWRPAAMKLGPFQEVILESSSVEELKEKLSEMSDVPLES
LEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPMELSE
EARNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPVQD
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagccaggagaaccagttcgtacccaaagagatccaaaatgcagcc
gaggagcccagagtgctgtgtatcattcaggatatcaccagtgcaaagacggtcaatgag
aggctgaccctcaacctgcctgcttcaaccaccctctccaaactatatgaagatgttgcc
cacaaagctggatatgtgaaagccacttttgaccttgcttggggaaactcgcccgacatg
gtgccactggaccacagcagtgagatgcccctctcagattctgggtttgagcctggtggg
aagaggaatttcctccagctcacggacaaagatggagagcagccccagattgcatcggat
gagtcaggaacagcagacagcagtgggctggatgacagttcccaggagcgaataatcggg
cctctaccgagagatggcactgcaggctgcagtggtgactacagcagtccgtcttactcc
tactcgtccatcctcaacaaatctgatacgggttacgtaggcctggtcaaccaagcaatg
acttgctatttgaacagtcttctacaaacgctgttcatgaccccggagttcagaaatgcg
ctctacaactgggagtttgaggagactgaagaggatccagtcaccagtataccctaccag
ctgcaaaggctgtttgttctgctgcagactagtaagaaacgggcgatcgagaccactgat
gtgacgcggagctttgggtgggacagcagtgaagcttggcagcagcatgacgtccaggag
ctgtgcagagtcatgtttgatgccctggagcaaaagtggaagcagacggagcaggctgac
ctgatcaaccagctgtaccaggggaaactgaaggattatgtccgttgtctggagtgtggc
tatgagagctggaggattgatacttacctggacatccctcttgtgatcagacccttcgga
gccagtcaagcctacggcagtgtggaagaggctttgcaggctttcatccaaccagaaact
cttgacgggcccaaccagtatttctgtgaacgctgcaagaagaaatgtgacgctcggaag
ggtctgagatttctacacttaccctacctactgacactgcagctgaagcggtttgatttt
gactacaccactatgcatcgcatcaaacttaacgaccgcatgactttccctgatgaactc
gacatgagtccattcatggatgtggaagatgagaagtcacctcagacagagagctgcact
gacagtggagcagagaatgaaggaagttgccacagcgaccagatgagcaacgacttttcc
accgatgattgtgtggatgagggcatctgcttggacagcaccggcagcacagagagggtg
ttgaagccaaagagtttactgacctttgagctgttctccgtcatggtccattctgggagc
gctgcaggtggccactactacgcctgcatcaaatcctacagtgatggccagtggtacagt
ttcaacgatcagcatgttagcaagatcacccaagatgatatcaggaagacacatggcggg
tcctcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatg
cttatttatagattgaaagatccctcaaggaatgcaaagtatttagctgcagaagacttc
ccagagcacataaagagtttggttcaaaaggagaaagagtctgaagagcaggaaaagcga
cagagggagattgagcgcaacacctgcaagattaagcttttctgcatgcatcctgtaaag
atgatgatggagagcaagctggaagtacacaaagacaaaactctcaaagaagcaacagaa
atggcctacaagctgatggagctggaggatttggtgtctctggactgctgccgcctggta
aagtatgatgagttccacgagtacctggagcgctcttacgaaggggaggaggacacaccg
atgggcctgctgcttggaggagtcaagtcctcatatatgtttgacctgctgcttgagacc
cgcaaaccagagcaagcgttccagccttacaaacctggagaggtaatggtgaaggtccat
gttgtggatctgaagagtgagaacatcgcctcaccagtcagtgttcgggcgtacttgaac
cagacgatcactgaattcaaacagctaattgcacaggctacagggctatctgcagaaagc
atgcgtgtggtcctggagcgctgctataatgacctgcggctcctatatgttccaaacaag
acactgaaagctgaagggttcttcaggagtaacaaggtttttgtagagagctctgagtcg
acagatcatcaggttgcttttactgactcagtcttgtggaaactgttggatcgtcacgga
aatacgattcggctcttagtcttactgcctgagcagtctcctggtaccttggccaacaga
actctttgccaaaacgtaggaggtgactgtgatgtgccccttgagggttcaaaaggtaac
aggaaatccgtagaggccatcctcgaggagagcacagaaaagttaaagaatctgtcgctg
cagcagcagcagcagcagcaaggctctagccccagtgacagccagaaaagctctgaaacc
agcgattttgaacatatcgaaagcccaacccaagaggactcaaactcttcactctgtgtg
gctgcagacaacagagagttagagaaccggatcagggccacagcggggggcagcagcagc
gcctcctctgaccctgagaaccactttgcctgtgaggagcgctcagactctgaggtgaac
aatgaccgcagcaccagctcagtggacagcgacatcttgagctccagccacagcagtgac
acactctgcaatgcagacagcgggcccatacagctggccaatggcttggactcgcacagc
atcacaagtagccgtcgctccaaagcccatgagggcaaaaaagagacctgggacactgct
gaagaagactctggaaccgacagcgagtatgacgacaatgggaagagcaaggcagaggct
cagtacctgtacttcagatcagagcctttttctcaggatgactcctcatcggaggcacaa
aaatgtttagtggttcacgtggacaagagaataacattagcagcatttaaacagaacctg
gagccatatgtgggtgtcacctccacccagttcaaagtgtttcgggtgtatgccaacaac
caggagtttgagagtgtacggctcaacgaaacgctctcatcattctctgatgacaacaag
ataactattcggctaggaagagcactgaaaaagggtgaatacagagtgaaagtgtatcaa
ctactggtgaatgaaccagagccctgcaagttcctcgtggacacggtgtttgccaagggc
atgactgtcagacagtctaaagaggagctgctcccccagttgaaagaacagtgtaagctt
gaccttagcattgacagagtccgtctcaggaaaaagacgtggaagaacccaggaacagtg
tttctggactaccatgtctatgaagaagacatcagcatctcctctaattgggaagttttc
ctggaagttctcaatgaaccggagaagatgaagtccatgtcacagctagctgtcctgacc
cggagatggagacccgctgcaatgaagctggggcccttccaggaagttattctggagagc
agcagtgtagaagaactcaaggagaagcttagtgaaatgagtgatgttcctctcgaaagc
ctagaatttgcaaagggtagaggaacattcccttgtgatatatctgtgttggagatccat
caagatttggactggaaccctaaggtgtcaactctcaacgtatggcctctgtacatctgt
gacgacggagctgtggtcttctacagggacagcacagaggagcctatggagttgtcggag
gaggcgcgtaatgagctgatgaagaaggagagcagccgtctgctcaagactggccaccgt
gtcagctactcgccacgcaaggagaaggcactcaagatctacctggatggaggccctgcc
aaggacccggtgcaggactga
DBGET
integrated database retrieval system
