Etheostoma spectabile (orangethroat darter): 116691801
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Entry
116691801 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116691801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116691801
04147 Exosome [BR:
esp04147
]
116691801
04090 CD molecules [BR:
esp04090
]
116691801
Enzymes [BR:
esp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116691801
Transporters [BR:
esp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116691801
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116691801
CD molecules [BR:
esp04090
]
Proteins
116691801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
AAA_16
Zeta_toxin
DUF2207_C
AAA_5
tRNA_lig_kinase
RsgA_GTPase
G-alpha
AAA_15
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
116691801
NCBI-ProteinID:
XP_032375597
LinkDB
All DBs
Position
6:complement(9022607..9038571)
Genome browser
AA seq
814 aa
AA seq
DB search
MIGVVSQEPILFATTITENIRYGRPDVTQWDIEQAAKEANAYDFIMNLPEKFETMVGDRG
TQMSGGQKQRIAIARALVRNPKFLLLDEATSALDAESETVVQAALDKVRLGRTTIIVAHR
LSTIRNADVIAGFQNGKVVELGTHSQLMKEQGVYHTLVTMQTFQNDKDWKEAEWELSADE
KSPLVKSLSQSSLHRKKSIRGSSFTTSEKEKEVQKLQDHTTEEDGNVPSIPFLKLMRLNL
PEWPYIFVGTICAIINGAMQPLFAIIFSKIITVFAHPDQAVVNQRAXILSLMFVVIGAVT
FVTMFLQGFCFGKSGEILTLKLRLGAFKAMMRQDLSWFDHPKNSVGALTTRLATDAAQVQ
GATGVRMAMLAQNIANMGTSVIISFVYGWELTLLVLAVVPIMALAGAVEMKALTGNAAKD
KKELEKSGKIATEAIENIRTVVSLNREPKFEALYQENLKIPFKNSQKNAHVHGITFSLTQ
SMLYFAYAGCFRFGAWLIEEGRMDIEGVFLVISAILYGAMALGEANSFSPNYAKAKISAS
HLMMLLDKVPAIDNLSQAGESPDKFDGNVHFDSVKFNYPSRPDVPILQGMNLKVKKGETL
ALVGSSGCGKSTTIQLLERFYDPREGRVLLDNIDAKQLNIHWMRSQIGIVSQEPVLFDCT
LAENIAYGDNSRTATLEEIKEAATAANIHSFIESLPQKYNTQAGDKGAQLSGGQKQRIAI
ARAILRNPKLLLLDEATSALDTESEKVVQDALDEASKGRTCIIVAHRLSTIQNADRIAVF
QGGVVVEEGTHQQLLTKKGVYHMLVTTQMGHGRE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagtggtgagtcaggagcccatcctctttgccaccaccatcactgagaatatc
agatatggccgacctgacgtgacgcagtgggacatcgaacaagctgccaaggaggctaac
gcttacgatttcatcatgaaccttcctgagaagtttgagacgatggtcggagaccgaggg
actcaaatgagtggaggacagaagcagaggattgcgattgctcgagctctagtccgcaac
cctaaattccttttgttggatgaagccacatctgctcttgatgccgagagcgagactgtt
gtgcaagcagcactcgacaaggtccgactgggtcgtaccaccataattgttgcccatcgc
ctctcaaccatcagaaatgctgacgtcatcgctggctttcagaatggtaaagttgtagag
ctggggactcacagccaactgatgaaggaacagggagtctaccatacactggtcaccatg
cagacctttcagaatgacaaagactggaaggaggcagagtgggagctttctgcggatgag
aagagccctttagtcaagtccctctctcagtcttctctgcacaggaagaagtccataaga
ggttcctcctttactacctcagaaaaagagaaagaggtgcaaaagctccaggatcacacg
acagaagaagatggaaatgttccctccatcccgttccttaaattgatgcgtctcaacctt
ccagagtggccgtacatttttgtggggaccatctgtgctatcattaatggagcaatgcag
ccactgtttgctatcatcttctcaaagatcatcactgtgtttgcacatcccgatcaagcg
gttgtcaaccaaagagccnacattctttctttgatgtttgttgttattggagctgtaacc
tttgtcaccatgttcctacagggtttctgttttgggaaatctggagagattctgaccctc
aaactaagactgggggcctttaaggccatgatgagacaggacctcagctggtttgaccac
cccaaaaacagtgttggagccctcactacaagactggccacagatgcagcccaagtacaa
ggggctacaggagtacgaatggccatgctggcccagaacatagctaacatgggcaccagt
gtgatcatttcttttgtgtacgggtgggaactgactctgctcgtcctggctgtggtgccc
ataatggcactggctggagctgtggagatgaaggcgctcactggaaacgctgctaaggac
aagaaggagctggagaagtctggaaagattgccacagaggccatcgagaatattcgtact
gttgtctctcttaacagagaacccaagtttgaggctttgtatcaggaaaacctcaaaatc
ccattcaagaactcacagaaaaatgcccatgtgcatggcattaccttctccttaacccag
tccatgctctactttgcttatgcaggctgtttccgctttggagcttggctaattgaggaa
ggaaggatggatattgagggagtattccttgtgatttctgctattctgtacggtgccatg
gctctcggagaagccaattccttttctccaaactatgctaaggccaaaatctcagcttcg
cacctcatgatgctgctggacaaagtgcccgccattgacaatctttcacaggcgggagag
tcaccggacaaatttgatggtaatgtgcactttgacagtgttaagtttaactacccttca
cgccctgatgtgcccatcctccaagggatgaacctgaaggtgaaaaagggagagactctg
gccttggtggggagcagcggctgtggaaagagcaccaccatccagctgctagagaggttc
tacgatcccagggaggggagagtgctgctggacaatatagatgcaaaacagctgaacatc
cactggatgagatcccaaataggcatcgtatcccaggagcctgtgctgtttgactgcacc
ttggccgaaaacattgcctatggtgacaacagccgcactgcaaccctggaggagataaag
gaagctgctacagcggccaacattcacagcttcatagaaagcctgccacagaagtacaac
actcaggcaggtgataagggagcgcagctgtcaggtggccagaagcagcgtatagccata
gcccgagccatactccgcaaccctaaattgttgctcctggatgaggccacctctgcactt
gacactgagagtgagaaggtggttcaggatgcgttggacgaggccagtaagggcaggacg
tgtatcattgtggcccaccgtctgtccaccatccaaaacgcagaccgcattgctgtcttc
cagggaggagtggtggttgaagaggggacacatcaacagctgctgaccaaaaagggagtc
taccacatgctggtcaccacacagatgggccacgggagggaataa
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