Etheostoma spectabile (orangethroat darter): 116694354
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Entry
116694354 CDS
T08457
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116694354
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116694354
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116694354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
116694354
NCBI-ProteinID:
XP_032379959
LinkDB
All DBs
Position
8:complement(3636703..3831993)
Genome browser
AA seq
912 aa
AA seq
DB search
MHRKKLPAQNMCADCPTSSAEKDPIGMQSKTELQTGPRGKGVCKKGCGLLLSGEDFNKED
HCCVDSLRTVTDALEERSATLEHENRMARLRWNRREQSLLAQVSSLQNEARLSALKYQRR
LHQHMLHISSIAEQVTGYYKRDVRTAADTQSQISDTATCAERTPQEQLYAPGVNGKELSK
SNHEETAEAFRASKDPVVVQVIRRTPSGRPHGPPQEIHVVDVCTQTDITFEHIMALAKLR
PSTPPVPDVCPFLLSDSCHSLHTMDQDYYEGTGYLSPVPADGERTEEFEYEEVELCRLNS
QEKLGLTLCYRTDEEEDVAIYVSEISPNSIAARDGRIREGDRILQINGQDVQDREEAMAA
LSNDESRNIVLLVARPEMQLEEAWLDDEHSEFLEQLKMEMLEEQQREEMELAALQEEQEN
EQRAEDDEPTCSTLPYHKDSVLSIKDRMECSEHNVLAHIQRRLSQCLRENQDTHLATGSM
RLEDKEDEDDDEMDGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECNMGEQGGVQHELRM
LNEELRSIELECQNIMQAHNLRKGQQSPSTGHSAPSTKDQSFHRSDPSRGKLAEINERLE
KSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQRMVSLTNQRNLRSSLATGPSLSPSPIPA
CLASAPGESSSHDNSNPSESNQASQAEEESRGKLKPFASHIPYFSPSHSSQQRQVNIPSH
ARHYQSYMQLIQQRSAVEYAQSQLSLLSVCKEPQRPNNEPKMEWKVKIRSDGTRYITKRP
VRDKILRERALKIKEERSGGMTTDDDAMSEMKMGKYWSKEERKQHLVRAKEQRKRREFMQ
RSRLESLKENPQSSSEGRKEVSIIELSQKKMMKKRNKKILDNWMTIQELMTHGTKAPEGA
KVHNAFLSVTTV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaaaagctgcctgcgcaaaatatgtgcgctgattgcccaacttcttccgcg
gaaaaggacccaatcgggatgcagtcgaaaaccgagctccaaactggccctcggggtaaa
ggtgtttgtaagaaaggatgcgggctcctgctgtccggtgaggattttaacaaagaggac
cactgttgtgtggactcgctccgcacggtcaccgatgcgctggaagaaagaagcgcgact
ttggagcatgaaaaccggatggcgaggctcaggtggaacaggagggagcagtccctgtta
gcccaggtgtcaagtctgcaaaacgaggccaggctatcggctctcaagtaccaacggaga
ctgcaccaacacatgctgcacatcagcagcattgcagagcaagtcactgggtactacaag
agagatgtgagaacagctgctgacacgcagagccagatatcagatacagcaacatgcgca
gagcgaacgccacaggagcagctctacgcacctggggtgaatgggaaggagttgtccaaa
tccaaccatgaggagactgcggaggcctttcgggcttccaaggaccccgtcgtggtgcag
gtcatcaggcggacccccagtggccgcccccatggcccccctcaggaaatccatgtggtc
gatgtgtgcactcagaccgacatcacctttgaacacatcatggcgctggcaaagctccgg
ccttcgacccctcctgtgcctgacgtctgtccatttctgctctctgacagctgtcattct
cttcatacaatggaccaggattactatgaagggacaggctacctctcccctgtaccggct
gatggagagaggacagaggagtttgagtatgaggaagtggaattgtgtcgactcaacagc
caagagaagttggggctaactctgtgctacagaacagatgaagaggaagatgttgccatc
tatgtcagtgagatcagtccaaacagcatcgctgccagagatggccgcatcagagagggg
gatcgcattttacagattaatggccaagatgtacaagacagagaggaagcaatggctgca
ctctccaatgacgagagtaggaacatcgtactgctggttgccagacctgagatgcagctg
gaggaggcctggctggatgatgagcacagtgagttcctggagcagctgaagatggaaatg
ttggaggagcagcagagagaggagatggaattggctgccttacaggaagagcaggagaat
gagcagagagcagaagacgacgagcccacctgctccacactcccttatcataaagatagc
gtactgagtataaaagacagaatggagtgctcagagcataatgtcctggcacacatacag
agacgcttgtcccagtgcctgagagaaaatcaggacacacaccttgccaccggctccatg
cggctggaagacaaagaggatgaggacgatgatgagatggatggcgatcgtttccagcag
ctcttggagctgaagtgtcagatacgtaacagcggtgagtacgatttgttctacagccgc
cgcagcaccattgagtgcaacatgggagagcagggcggcgtacagcatgagctacgtatg
ctcaatgaggaactgcgcagcatcgaactagaatgtcagaacattatgcaggcccataac
ctccgtaagggccagcagtctccctccacaggccactctgcaccctcaaccaaagaccaa
agcttccatcgaagtgacccctcaaggggtaagctggctgaaattaatgagaggctggag
aaatcagacaaggacagctccagtgcctataacacggcggagagttcacgaagcactcct
ttggcaatggaccgctcgccggagcactcactccagaggatggttagtctcaccaaccag
aggaacctccgcagcagccttgccactgggccttctcttagcccaagccccatcccagca
tgccttgcttcagccccaggggaaagcagcagccatgacaacagcaatccttctgagtcg
aaccaggcatctcaggctgaggaggagagcaggggcaagttaaagccatttgcttcccat
atcccttacttctctccatcccacagttcccagcagaggcaggtcaacatcccatcacat
gcccgccactaccagagctacatgcagctcatccagcagcgctcagctgtggagtacgct
cagagccagctcagcctgctcagtgtctgcaaagagcctcagaggcccaataatgagccc
aagatggagtggaaggtcaagatccgcagtgacggcacgcgctacatcaccaagaggcct
gtgagagacaagatcctgagggagcgagccctaaagattaaagaggagcgtagtggggga
atgaccactgatgatgatgcaatgagtgaaatgaagatggggaagtactggagtaaagag
gaacgaaagcagcacctggtcagagcaaaagaacagaggaaaagacgagagttcatgcag
cgtagtcggctggaaagcttgaaggagaaccctcagagcagcagcgagggtcgcaaggaa
gtcagcattatagagctcagccagaagaagatgatgaagaaacgcaacaagaagatcctg
gacaactggatgaccattcaggaactgatgactcatggtaccaaggcccctgagggagcc
aaggtgcacaatgccttcctatcagtcactactgtataa
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