Etheostoma spectabile (orangethroat darter): 116695159
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Entry
116695159 CDS
T08457
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116695159 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116695159 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116695159 (usp13)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116695159 (usp13)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116695159 (usp13)
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116695159 (usp13)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116695159 (usp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
116695159
NCBI-ProteinID:
XP_032381141
LinkDB
All DBs
Position
9:20483118..20510807
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AA seq
862 aa
AA seq
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MAADLGELLVPYMPTIRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEVKL
VIFPDHFEIALPNIEELPALVTIACDAVLNAPSAYKKQELESWDEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALDHYKETKYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNWHQQKGVSPRMLKALV
SRGHPEFSSNRQQDAHEFFLHIINVVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEAKQRDAEENMQAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGIKTSRFASFPEYLVLQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQASEEELPDLMPPIVLPEDTRDNSMGSMDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPSTSDSPMGATLLGNSPPEESI
AILTSMGFPRAHSIQALKATNNNLERALDWIFTHPEEESDALSDMADTEPNGNALSNTNS
HSDSTLSPDRDASGPRVKDGPGRYELFGFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKV
CLSERPPKDLGYIYFYHRLSSS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatacatgcccaccatcagagtgcccaaa
acaggagacagggttttcaagagcgagtgcgccttttccttcgactctccagagtcagag
ggaggcctgtatgtgtgtatgaacacattcctgggctttggacgggaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacgacatgtcaaagagaaa
gccacaggagctgcaggaggcgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaggactatgaatatgaagacgaggtcaagctt
gtcatttttccagaccacttcgagatcgccttaccaaatattgaggagttgcctgctctg
gtgaccatcgcctgtgatgcagtgctcaatgcaccatcagcttacaagaagcaggagctt
gaatcctgggatgaggagatccaggtgtccagacatgccaggagcctcagacaactggat
aatggggtcaggatcccacccagtggttggaagtgtcaaaagtgtgagatgagagaaaac
ctgtggctgaacctgacagatggagcagtgctctgtgggaagtggttctttgatgggagc
ggaggcaacggccatgctctggaccactacaaagagaccaaataccccctggctgtcaaa
ctggacaccatcacccctgacggagcagatgtctactcatttgaggaggaagaagctgtg
ttggatccccacatatcagaacacttgtcacactttggaatagacatgctacagatgcag
aaaagaaccgagaatggtcaccacacagacaataactcccggccacgggtcagtgaatgg
gaggtgatccaggagtctggcatgaagctgaaagcggtgtttggctctggttacacaggc
atcaaaaacctgggaaacagctgctacctcggcacagtgctacaggtcctcttcagcatc
ccagactttcagaggatgtatgttggtaatcttcagagaatatttgactattcacccctt
gaccccacccaggacttcgccacacaaatggctaaactgggacatggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaactggcaccagcagaagggcgtctctccccggatgttaaaggccttggtc
agcaggggacacccagagttctcctctaacagacaacaagatgcccacgagttcttcctg
cacatcataaatgtggtggagaggaacagtgcaggctcggagaacccaagtgatgtcttc
cgcttcctggtggaggagcgagttcagtgctgccagacacgtcgggttcgttatactcag
cgggtggactactgcatccagctgccagcccccattgaggcggccaccaatcgagaggag
ctgctggcatacgaggccaagcagagggacgcagaggagaacatgcaggctcctcctgag
ccagtcagagcacggatccccttcactgcctgcctgcaggccttcacagagccggagaat
gtccctgacttctggagctcagcgctgcaggcaaagtcagccggaatcaaaacttcccgt
tttgcctccttcccagagtatctggttttgcagataaaaaaattcacatttggggttgac
tgggtgccaaagaaactagacttggccatagatgtcccggactttctggatctgagccgg
ctgcgggccactgggctgcaggcgagtgaagaggagctgcctgaccttatgcctcccatt
gtgctacctgaagacaccagagataactccatgggctctatggactctccagaaatagac
gaggcagcagtaatgcagctggcggagatgggctttccgctggaggcctgtaggaaggcg
gtctactacacaggcaacatgggcccagagatggccttcaactggatcattgcacacatg
gaggagcctgactttgcagaacccctcactctgccctccatgatggatccgggtccctcc
accagcgacagccccatgggcgccaccctcttgggcaactcgccccccgaggagagcatc
gccatcctcacttcaatgggctttccccgcgcccacagcatccaggcacttaaagccacg
aacaacaacctcgaacgagcactggactggatcttcacccacccagaggaggagagtgac
gccctttcagacatggccgacacggagcctaacggcaatgctttgtctaacaccaactca
cacagcgactccacactgtccccagacagagacgcgtcgggccctcgggtcaaagacgga
ccgggacgttatgagctctttggtttcatcagtcacatgggaacatccacaatgtctgga
cattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaacgaccacaaagtg
tgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtct
agcagttaa
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