Etheostoma spectabile (orangethroat darter): 116698037
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Entry
116698037 CDS
T08457
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116698037
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116698037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
116698037
NCBI-ProteinID:
XP_032385658
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All DBs
Position
2:complement(15926040..15963139)
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AA seq
458 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNAGGAPAVVRGMKRGDPEPDGQTTAAL
VDSTGAECKRPRIDGSGGIGEVGQNNDPLALGYHGYASHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPLEAGGAANSAANAANSLSGQQSDGSSQIDG
QSVVGSGGVGGGGSIGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAVSTAATFRGAHLRGRARPVYSA
VRAAVPQPAIPTYPGVMAYQDGFYSAADLYGGYAAYRYAQPTAVATPAAAAAAAAAYSDS
YGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtccatcccaacgcgggcggcgctcctgcg
gtagtccggggtatgaaacgcggagacccggagcctgacggacagacaacggctgctctt
gtggactcgaccggggcggagtgcaagcgtccccggatcgacggctcaggagggatcggc
gaggttggtcagaacaacgaccctttggcccttggttaccatggctacgcgtctcatagt
cagggctctcaggatagtgctggcggtcaggagggactcgtacctccacctttctccgca
ttccctccacctccaccgccacccccccagaatggcctggcactggattacgggggcagc
ctgtatgcagcgggggccgtccagggccccttggaagctggtggagcagcaaacagcgcc
gccaatgctgccaacagccttagtggtcaacagtccgatggctcctcccagattgacggt
cagtcagttgttggctcaggaggcgtaggtggtggagggagcattggggatgattcagac
gccaaggggacccccaaacgccttcacgtctccaacattcccttccgcttccgagatccc
gacctacgacagatgtttgggcaatatggcaaaatcctcgacgtcgagataattttcaat
gaaaggggatccaagggctttggttttgtaacatttgagacaagtgcagatgcggagaag
gcccgagagaaacttcacggtacgctggtggaaggacgtaaaatcgaggtaaataatgcc
acagccagagtgatgacaaacaagaagatgaccaccccttactctaacggagagggcctc
gcaactctgccatacgctggatggaagttgagtcccatggttggagccatgtacagccct
gaactctatacagttccggggtttccatacccagccgcagcagcggcagcagctgtctct
actgccgcaacctttcgaggcgctcatctccggggtcgtgcaaggcccgtctacagcgca
gtcagggcagctgtgccacaacctgccatccctacctaccctggtgtgatggcctatcag
gatggcttttacagtgcagctgatctctatggcggctatgcagcgtatcgttacgcccag
ccaactgcggtagcaactccagcagcagcggcggctgcagcagcagcttacagtgacagc
tatggacgagtttacactgcagacccctaccatgctgcgcttgccccagctgcctatggt
gttggagccatggccacactgtacaggggaggctacagcaggtttgccccttactaa
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