Etheostoma spectabile (orangethroat darter): 116698874
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Entry
116698874 CDS
T08457
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116698874
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116698874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
Gp58
Motif
Other DBs
NCBI-GeneID:
116698874
NCBI-ProteinID:
XP_032386989
LinkDB
All DBs
Position
12:complement(23564110..23569906)
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AA seq
557 aa
AA seq
DB search
MAQQGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKKFWDGEDEKKIYSCPQCRET
FTQRPVVVKNTMLAVLVEELKKTGLQAAPVDHCYAGPEDVACDVCTGRKLKAVKSCLVCL
VSYCKKHLQTHYDCAAFEKHKLVEPSKNLQENICSRHDEVMKMFCRTDQQCICYLCPVEE
HQGHDTVSAAAERTERQKELEGSREHIQQRIQDREKDVKLLQQEVEAINLSADTSVEDSE
KIFTELIRLMEKRSSDVEQMVRVQQKSEVSRVKELQEKLEQEITELKRKDAEMKKLSDTE
DHNQFLHNYSSLSPLSGSTSSINIRPLRYFRDVTAAVSEARDKLQELLNEIRTNIYLAVV
EVDVLLSNPQPEPKTRAQVLKYSREITLDPNTAHPQLWLSDRKATFMKKHLSYPSHPDRF
AEWQQVLSEQGLTGRSYWEVEWRGGGVDVAVAYKNISRAGRPDECGFGHNDKSWALHCQD
NTFIFCYNNVQTYVSGPRSSRLGVYLDHSAGTLSFYSVSDDTMTLLHRVQTTFTQPLYAG
LRVYYDYGDTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagttcagctggaccgggaaactttctcttgttcgatctgtctggat
ctcctgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
aagttctgggatggagaggatgagaagaaaatctacagctgtcctcagtgtagggagacc
ttcacacagaggcctgttgttgtcaaaaacaccatgttagcagttctagtggaggagctg
aagaagactggactccaggctgctcctgttgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagcagtcaagtcctgtctggtgtgtctg
gtctcttactgcaagaaacaccttcagactcattatgactgtgctgcgtttgagaaacac
aagctggtggagccctccaagaatctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgccctgtggaggaa
catcaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagctc
gaggggagtcgagaacacatccagcagagaatccaggacagagagaaagatgtaaagctg
cttcaacaggaggtggaggctatcaatctctctgctgatacatcagtggaggacagcgag
aagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtggagcagatg
gtccgagttcagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagatgaagaagctctcagacacagag
gatcacaaccagtttctccacaactactcctcactgtcaccactcagtggatctacatcc
agcatcaatatccgtcctctgcgctactttagggatgtgacagcggccgtgtcagaagcc
agagataaactacaggagcttctaaatgagataaggacaaatatctatctggctgtggtt
gaagtggatgttttactgtcaaatccacaaccagagcccaagaccagagctcaagtctta
aaatattcacgtgaaatcacactggatcccaacacagcacacccccagctgtggctctct
gacagaaaagcgacatttatgaaaaaacatctgtcttatcctagtcacccagacagattc
gctgaatggcagcaggtcctgagtgaacagggtctgaccggacgtagttactgggaggtg
gagtggaggggaggaggggttgatgtagcagttgcatacaagaacatcagcagagcaggg
agaccggatgaatgtggatttggacacaatgacaagtcttgggcattacactgtcaagat
aacacttttatcttttgttacaacaacgtccaaacttacgtctcaggtcctcggtcctcc
agactaggagtgtacctggatcacagcgcaggtactctgtccttctacagcgtctctgat
gataccatgactctcctccacagagtccagaccacgttcactcagcccttgtatgctgga
cttcgggtttattatgattatggagacactgctgagttctgtaaactgaaatag
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integrated database retrieval system
