Etheostoma spectabile (orangethroat darter): 116700389
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Entry
116700389 CDS
T08457
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116700389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116700389
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116700389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
116700389
NCBI-ProteinID:
XP_032389413
LinkDB
All DBs
Position
13:complement(11089470..11100456)
Genome browser
AA seq
1263 aa
AA seq
DB search
MRVLRRRAAAMSPREKHLAVLSALGVVSLALYYIPTFLCATLILVVCCIVCYYHSGEPLP
ARLGLNPRAGVKVPAVLRRWLWGWGVTGVSVAARGRRKSGRNKNELPEAEGHFRARVVES
GIYRRETLASDSFLFSPRDFLMGSYIGKPESPTADSGRPRAGRNPREQLREKLSRPNHAV
YTPNRRLSFAGEPPGTVGRFTITPQRHYPLQQPGLSSVGVLPPVKWDGFMKKNIRSPRNS
PAVLSPVTVKIARPDYHSSPSLDHLTCAGLPRAPVDPCSRESVLKVLKDSRKREVEDEDR
SFASEQKSKRRRNDSGGSAHSAFEPLLPNGMPSQLVPKPGNLKRGMASLAEDSIMKRSRT
SSISSGSGVHATRGTPGTMRNPIQSSYSSSLGLSQWKKRSAPSSPLSSPGSSRSQTPEGA
SKRAREDDGQSPSSASSVRSDQTASDKAPVTCFAAKLTPVPKVPVTTSTDSTGSGGKRKR
KIQLVSIHRDDHISLPPPPELGYSITVKDIDEEKKAALSKIQKVLETPAAEPEKSVSPLA
TTSTQPASSTSSTTTTTLSSLLAAPLPTATSSAIPVINLDPSPGSSVSTAPVASNPLLEA
LKMKISIPASSTSGANTTTVSASTTPVQPSSLTLKVSTSVVAPQLPPASQSQSSSAGVEQ
PSAFTQVLGQLSKASSSTPPVAGTGMFGLSSQMSTPPASSASNPVTATATAPASSSGSVS
YTNPLLASGFKPIFSVTSTTSSATLAPDSRPPAQNFKPIFGAATASAGFGPPPPYTTSNP
ASTICSSSASSMFGSTSSTTVTPSVFPGMTNTLTGTASTTSITSTQSAAQPDVKSLFGNW
SAPSTTSTSSASAQSPNTGSTFQFGTGTTTTAAAVAPAAAPSAATTTSSNSTFAFGAQQP
DPQAANQKVFAFGHAAPSQNPTTASFGGFAMASTASTTAAATTQSTFAFGKSSFQTPAAQ
STFGSSVATAAPSTFGSSAVTAAPSTFGSSAATAAPSTFGSSAATAAPSTFGSSAATAAP
STFGSSAATAAPSTFGSSAAAASTFGSSAATAKPFTFGGSGGASSTPVSNTAPPPFPFGS
AAVTTAAGFGTPAKPAFGANSTGFAFGGTTGPTAAPSAAPSFGAATQTQSSSSATFTFGS
AAPQQVPSGPAPSAPSGFNFGAGIPCPQFGTPVANNPAPQMGSFNFGAAATDKPAFGTST
PSFGQSAAAAGPIPFGSPGTPSQGFNAVPFGSPATPSFSIGAGSKPSGARQRLQARRQHT
RKK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggcggcgcgctgccgccatgtcacctagggagaaacacttagctgtt
ctctctgctttaggcgtagttagtcttgctctatattatattcctacttttctttgcgcg
accttaattcttgtagtgtgttgtattgtgtgttactatcacagcggagaaccgcttccc
gccaggttaggcctcaatccgcgggctggggtgaaggtcccagccgtgctccggcgctgg
ttgtggggttggggagtgaccggcgtgtcggtagccgcgcgggggagaagaaagagcggc
agaaacaaaaacgagctcccggaggcagagggacacttcagagcaagggtcgttgaaagt
gggatttatcggagggaaaccttggcaagtgactcgtttcttttcagcccgcgggatttt
ctaatggggagttacatcgggaaacccgaaagtccaaccgccgactccgggaggccgaga
gcagggagaaatcctcgagagcagctgcgggaaaagctgtccagacccaaccatgctgtc
tacaccccgaacaggaggctgtcgtttgctggggaaccgccgggcacagtgggcaggttc
accatcaccccccagcgtcactatcccttgcaacagccgggtctatcatcagtgggagtc
ctacctcccgtcaaatgggatggcttcatgaagaaaaacatccgtagccctcgcaactcc
ccggccgtcctcagccccgtcaccgtgaagatcgccaggccagactaccacagctcccct
agtctggaccatctgacgtgtgcagggcttcctagggcccctgtggacccctgctccaga
gaaagtgttctcaaggtgttgaaggatagccgcaagcgagaagtggaggatgaggacaga
agctttgcatctgagcagaaaagcaaaagaaggcgtaacgacagcggcggaagtgcacac
tctgcttttgaacctcttttacccaatggaatgccatcacagctggtccctaagccagga
aacctgaaaagaggtatggcttcactggcggaggattctattatgaagaggtctcgcacc
tcttccatcagctctggcagtggggtacatgccacgagaggaaccccaggcaccatgaga
aaccctatccagagctcttacagctcttcactcggcctcagccagtggaagaagcggtca
gcacccagctcccctctgtccagccccggatcatctcgctctcagactccagagggagcc
tccaaaagagccagagaggacgatgggcagtctcccagctctgcatcctcagtgaggtca
gaccagacagcctccgacaaggcacctgtgacttgttttgcagctaaactgactccagtc
cccaaggtcccagtcactacctcaacagactcgactggtagtggtgggaagcgaaaacgg
aagatccagctggtgtccatccaccgggacgatcacatctctctgcctccgcctccagag
ctgggctactctattactgtgaaagacatagatgaagagaaaaaggctgccctcagcaag
atccagaaggtcctggagacacctgctgcagagccggagaagtctgtctctcccttagcc
accacctccacccagcctgcctcctcaaccagctccaccaccaccaccaccctgagcagc
cttctggcagctcctctgccaacagccaccagctctgccatcccagtcatcaacctggat
cccagccccggcagcagtgtcagcacagcacctgtagcctccaacccactactggaagct
ctgaaaatgaaaatcagcattcctgctagctccacatctggtgccaacacaactacagtg
tctgcatcaaccacaccggtacaacccagcagcctaaccctgaaggtttcgacttcagtg
gttgccccacagctccctcctgcctcccagtctcagtcctcctctgctggtgttgagcag
ccctctgcctttactcaggttctgggtcagctctccaaggcatccagcagcactccacct
gtagcaggaacaggcatgtttggactgtcaagccagatgagcaccccccctgcttcttca
gcctctaatcctgtcactgctactgcaactgccccagccagcagctcaggatccgtcagt
tacaccaaccctctgctggcttcagggttcaagcccattttttccgtcacctccaccacc
tcctcagctacgttagccccagacagcagacctcctgcccaaaatttcaagcccatcttt
ggggctgctactgccagtgctggctttggaccgcctccaccctacaccacctctaaccca
gcttctaccatatgttcaagcagtgcatcctcaatgtttggatcaacaagtagcaccaca
gttacaccatctgtctttcctggtatgaccaacaccctcactggcacagcctccaccacc
tccatcacaagcacacagtctgcagcccagccagatgtgaaatctctctttggaaactgg
tcagcaccatccacaaccagtaccagctcagcctcagcgcagtcccctaatacagggagc
acctttcagtttggaactggtaccaccactactgcagctgcagttgctcccgctgctgcg
ccctctgctgctaccaccacctccagcaacagcacctttgcatttggtgcccaacagcca
gacccccaagcagccaaccagaaggtatttgcctttggtcacgcagcacccagccagaac
ccaaccactgcttcatttggaggctttgccatggccagcaccgcctccactactgctgct
gccaccacccagtcaaccttcgcctttggaaagtcatcgtttcaaacaccggcagcacaa
tcaacctttggctcctcagtggcaacggcagcgccgtcaacctttggctcctccgcggta
acggcagccccgtcaacctttggctcctccgcggcaacggcagccccgtcaacctttggc
tcctccgcggcaacggcagccccgtcaacctttggctcctccgcggcaacggcagcgccg
tcaacctttggctcctccgcggcaacggcagcaccgtcaacctttggctcctccgcggcg
gcggcgtcaacctttggttcctcagcggcaacggcaaaaccgttcacctttggaggcagc
ggaggagcatcatccacacctgtctctaacaccgccccaccccctttcccttttgggtca
gcagctgtcaccacagcagccggttttgggaccccagctaaaccagcatttggagcgaac
tccactggttttgctttcggtggcaccactggtcccacagctgcaccctctgccgcacca
agctttggtgcggccacacagactcagagctcctcctcagccactttcacatttggcagt
gctgctcctcaacaggttccctctgggcctgctccgtcagcacccagtggatttaacttt
ggtgctggtataccatgcccccagtttggaacaccagttgccaataatcctgcaccgcag
atgggaagcttcaactttggggctgctgctactgacaaaccagctttcgggacgtctacc
ccatccttcggccagagtgctgctgccgctggtccaattccctttggaagtcctggaact
ccaagccaaggcttcaatgctgttccttttgggtctccggcaactccctccttctctatc
ggagccggatcaaagccatctggagctcgccagaggctgcaggcgcggaggcaacacacc
aggaagaagtaa
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