Etheostoma spectabile (orangethroat darter): 116700866
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Entry
116700866 CDS
T08457
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116700866 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116700866 (ddx46)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116700866 (ddx46)
Spliceosome [BR:
esp03041
]
Complex A
U2 snRNP components
U2 related factors
116700866 (ddx46)
Complex B
116700866 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
116700866
NCBI-ProteinID:
XP_032390215
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All DBs
Position
13:complement(14943934..14958213)
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AA seq
1015 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRNRRERSRSRDRRRSRSRDRKRV
RRSRSRERRRSRSRDRRRSGSRSRARRSRSGSPSKSRRPDESRSNEKDNVDPLSDKKKIK
EEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKRELEEMKQGKKW
SLEDDEGEEAEEDDVDPLDAYMEEVKQEVKKFNMGAMKGNDKKGAMTYTKVVTVVKTKKG
PNTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIQYEPYRKN
FYVEVPELARMSPEEVNVYRLELEGIAVKGKGCPKPIKTWVQCGVSMKILGAMRKHGYEK
PTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLMPMFRHIMDQRPLEESEGPISIIMTPT
RELALQITKECKKFSKQLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANS
GRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRI
LVKPIEVQVGGRSVVCSDVEQHVLVIEEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADT
LLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNY
NCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQVRYAGDIIKALELSGSPVPSELERLWA
SFKDQQKAEGKIIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIE
EQIESMFNSKKRVKDLSAPGSATGSAGSAATTSAAQGGLPGLGPPSAGNIQKLEMAKKLA
LKINAQKNLGAEAQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKL
EEEQRAAEQAETIKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPG
KEPKEGERKIYLAIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcgagacactacaggaagcgttctgcgtctcggggacggtcgggtagc
cgttcaaagagtcgctccccggacaaacgctccaagaaagatgaccgagaccgaaacagg
agggagcggtcacggagccgggaccgccgcaggtcccggtccagggacagaaaacgagtc
aggcgctcccggagcagagagaggaggaggtccagaagccgagacaggaggaggtcgggc
agcagaagccgagcccgcaggtcccgatctggtagccccagcaagagcagaagaccagat
gagtccaggagcaatgagaaagacaacgttgatcctttatctgacaagaaaaagattaaa
gaggagaaagaggatgagaaggttgaggatcaagactttgaccaaaacaagctagaggag
gagatgaggaagaggaaggaacgagtggagaaatggagggaagagcagcggaagaaggcc
atcgaaaacatcggagagatcaagagagaactggaagagatgaagcagggcaagaagtgg
agcctcgaggatgatgagggtgaggaagcggaggaggacgacgtggatcctctggacgcc
tacatggaggaggtgaaacaggaggtgaagaagttcaacatgggagccatgaaaggaaat
gataagaaaggagcaatgacatataccaaagtggtgaccgttgttaaaaccaagaaaggg
cccaacactcacaagaagaagggggagctgatggagaatgaccaggatgctatggaatac
tcgtcagaggaggaggaggtggatctgcagacggctctgactggcttccagaccaaacaa
aggaaggtcctggagcctgttgaccatggaaagatccagtacgagccgtaccgcaaaaac
ttctatgtggaggtccctgagcttgccaggatgagtccagaagaggtgaacgtgtacagg
ctggagttggaaggcattgccgttaaagggaagggctgtcccaaacccatcaagacctgg
gtgcagtgtggagtgtctatgaagatcctcggtgctatgaggaagcatggctacgagaag
cccaccccaatccaggcccaggccatccctgccatcatgtcaggccgagacctgattggc
atcgctaagaccggcagcgggaaaaccatagccttcctgatgcccatgttccgacacatc
atggaccagaggcccctggaggagtctgagggaccaatctctataatcatgaccccgacc
agagaattggctctgcagatcaccaaggaatgtaagaagttctctaaacagctgggactc
agggtggtgtgtgtctatggaggcaccggcatcagtgaacagattgctgagctgaagaga
ggcgctgagataatcgtgtgcacacctggaagaatgattgacatgttgggggccaacagc
ggtcgtgtcacaaacctgcgcagagtaacatatgtggtgttggatgaagcagacaggatg
tttgacatgggcttcgagccacaggtgatgcgtattgtggacaacgtccgtccagaccgc
cagacagtcatgttttcggctaccttccccagagccatggaggccctggctcgtaggatc
ctggtcaagcccattgaggtccaggtgggaggccgcagcgtcgtctgctctgatgtggaa
caacatgtgctggtgattgaagaggacaagaagtttctgaagctgctagagattctgggt
cactaccaggagaaaggctcggtcatcatctttgtggacaaacaggagcatgcagacaca
ctgctaaaagacctgatgaaagcctcgtacccctgcatgtcactgcatggaggaattgat
cagtacgacagagacagcatcatcaacgactttaagaatggagcgtgtcgtctgatggtg
gccacctctgtggcagccagaggcctggacgtcaagcagctgatcctggtggtcaactac
aactgtcccaaccactacgaggactacgtccacagggccggacgcacaggcagagcaggc
aacaagggctttgcctataccttcataacagaggatcaggttcgctatgctggggatatc
atcaaagctttggaactctccggctctcccgtcccgtctgaactagaacggctttgggcc
tccttcaaagaccaacagaaagcagagggtaagatcatcaagagcagcagtggcttctca
ggaaaaggctttaagtttgatgagacagaacacgcgttggcgaatgagagaaagaagttg
cagaaagctgctcttggactgcaggactcggatgatgaggatggagccctggatattgag
gagcaaatcgagagcatgttcaattccaagaagagggtgaaggatctgtctgctcccgga
tcggccaccggttcggcaggatcagctgccaccacatcagctgcccaaggagggctgcca
ggcctcggacccccatctgctggaaacatccagaaactggagatggccaagaagctggcg
ctcaagatcaacgctcagaagaacctgggcgctgaggctcaggatgtgatgcagcaggcc
accaacgccatcctgcggggtggtaccatcatgacaccctctgtgtcagccaagaccatt
gcggagcagctggcggagaagatcaatgccaagctaaactacacccccgtggagaagctt
gaggaggagcagcgggcggctgaacaggccgagaccatcaagagatacgaagaggagctg
gagatcaacgacttccctcagacggcccggtggaaggtgacatctaaagaagctctgcag
aggatcggtgaatactctgaagccgccatcaccatcagaggaacctatttccctccaggc
aaagagcccaaggagggagaacgcaagatctacctggctattgaaagtgcaaatgaactg
gctgtgcagaaggccaaaacagagattacgcggttaatcaaggaagagctcatcagatta
caaaattcctaccagccgacaagcaaaggccggtacaaagtgttgtag
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