Etheostoma spectabile (orangethroat darter): 116702988
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Entry
116702988 CDS
T08457
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116702988 (rbfox1)
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116702988 (rbfox1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116702988
NCBI-ProteinID:
XP_032393448
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All DBs
Position
15:complement(30785022..30949381)
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AA seq
411 aa
AA seq
DB search
MQHPGGTCVALPNVDACPPLSCAALTFMYLQQGNQDTPAPPDPSMAQAYPSAQFAPPPQN
GIPAEFTASHPHPHPHSHPHPHQHPAAPQDYTGVQASISEHPLNMYQSSQSHSEQSGSDS
VSQTVTGTATQTDDAAQTDIQPQTQTVPESTDSKAQPKRLHVSNIPFRFRDPDLRQMFGQ
FGKILDVEIIFNERGSKGFGFVTFEHSVDADRAREKLHGTVVEGRKIEVNNATARVMTNK
KTVNPYANGWKLNPVVSAVYSPEFYAVPGFPYPTASAAAAYRGAHLRGRGRTVYNTFRAA
APPPHIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTAATAAAYSDSYGRVYAADPYNHTL
TPAATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctggaggaacatgcgtggcgttacccaacgtggacgcctgtcctccgctg
tcctgcgcagccctcaccttcatgtatttacagcagggtaaccaggacacaccggcaccc
ccggacccatccatggcccaggcttacccatcagcccagtttgccccccctccccagaac
ggcatcccagctgagttcacagcttcgcacccccatccacatccacactcccacccgcat
ccacaccagcaccctgcagcgccgcaggactacaccggggtccaggcctccatcagtgag
catccactcaacatgtaccagtcctcacagagccacagcgagcagagcgggtcggactcc
gtcagtcagacggtcaccggcacagccacacagacagatgacgcagcccagacggacatt
cagccacagacacagactgtacctgaaagcacagacagcaaggcccagcccaagagactt
cacgtctcaaacatcccgttcaggttcagagacccagacctcaggcaaatgttcggccaa
tttggcaaaatcttagatgtggaaatcatcttcaacgagcgtggttccaagggttttggt
ttcgtaacgttcgagcatagcgtggacgccgacagggccagagagaaattacacggcacc
gtggtagaaggccgtaaaatagaggtcaacaatgcaacagcccgagtaatgacaaataag
aagactgtcaacccatatgcaaatggctggaagttaaatccagtggtcagcgctgtctac
agccccgaattctatgcagtaccaggttttccctacccaacagccagtgcagcagcagcg
tacagaggagcccacctaagaggccgaggacggaccgtgtacaacacattcagggcggcg
gctccgcccccccacatcccagcttacggaggtgttgtttaccaggatggattttatggt
gcagatatttatggtggttacgctgcctacagatatgcccagcctactgctgccacagct
gctgcatacagtgacagttacggacgagtatatgctgccgacccctacaaccacacactc
actccagcagccacatacagcgttggtgccatgaatgcgttcgccccactgacagatgcg
aaaacccggagccatgccgacgacgtggggctagtgctgtcctctctccaggctagtata
taccggggaggctacagccgctttgcaccctattag
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