Etheostoma spectabile (orangethroat darter): 116703526
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Entry
116703526 CDS
T08457
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116703526
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116703526
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
116703526
NCBI-ProteinID:
XP_032394199
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Position
15:complement(1568221..1614266)
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AA seq
474 aa
AA seq
DB search
MLMSTDVASIMIPVSRGIMERDIDTTAGPLANAAGGPAAVRGMKRGDPEPDAQTAAALTD
FAVAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGLVAPPFSPF
PPPPPPQNGLAGTEFVPGAMFGGGGQGPAELGAGANGAPTNTTTNNNGKTEEGSQGEAGL
QCGTGGSGSGGSVGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNER
GSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALST
LPYAGWKLSPMMGAVYGPEIYAVPGFPYPSAAAAATTAAAAFRGAHLRGRGRPVYSAVRA
AVPQPAIPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAYS
DSYGRVYTTDPYHALTPAAAAYGVGAMQQSLSVEGLMALQASLYRAGYSRFAPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgatacccgttagtcggggaataatggaa
agagacattgatacgacagccggaccccttgcaaacgcggccgggggtccagcagctgtc
cgggggatgaagcgaggagacccggagcccgacgctcaaacagcagctgccctgacggac
tttgccgtggcggagtgcaaaagacccaggatagacggaaccgggagtgttgttggtgat
attggacagaacaatgagcctttaaaccccggtttccatggataccctccccacagtcag
ggctctcaggattcaacaggaggacaggagggattggtggccccgcccttttcaccgttc
ccccctccaccccctcctcaaaacgggctagcagggacagagtttgtcccaggggccatg
tttggtggtggaggccaaggcccagcagagttaggggctggtgctaatggagcccccacc
aacaccaccaccaacaacaacggaaagacagaggaggggtcccagggtgaggcgggccta
cagtgcggcacaggaggctcaggatctgggggctctgtgggagacccctccgaggccaaa
gggacccccaaacgcctccacgtctcaaacatccccttccgctttcgggaccctgacctc
aggcagatgtttgggcaatatgggaagatcctggatgtagagattattttcaatgagaga
ggatcaaagggttttggctttgtgacatttgagaccagcgcagacgcagagaaagccagg
gaaaagctccacggcacattggtggaaggtcgtaagattgaggtgaataatgccacggcc
agggtgatgaccaacaagaaaatggtcagcccctaccctaatggagaggctctcagcacg
ctgccttatgcggggtggaagttgagtcctatgatgggggccgtgtacggaccagagatc
tacgcagtcccagggtttccctatccttcagcagcggcagcggccaccacagcagccgcc
gccttccgcggtgcccacctccggggccggggccggccggtctacagtgctgtgcgggct
gccgtgcctcagcctgccatcccgacctaccccggtgtggtgtatcaggatgggttttac
ggagctgcagacttatatggaggctaccctgccgctgctgctgctgctgccgccgccgct
tatcgctatgcccagccggccgccgtaaccggagcaaccgccgcagctgccgcctacagc
gacagttacggccgggtgtacactacagatccctaccacgctttaactcctgccgctgcc
gcttacggagtgggagcaatgcagcaatcattgtctgtagaaggactcatggcactgcaa
gccagtttataccgggcaggatacagtaggtttgctccttactaa
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