Etheostoma spectabile (orangethroat darter): 116707334
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Entry
116707334 CDS
T08457
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116707334 (frem1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
116707334
NCBI-ProteinID:
XP_032400552
LinkDB
All DBs
Position
19:complement(6340871..6409192)
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AA seq
2185 aa
AA seq
DB search
MGSRGQTLAWTLFPVFLLGLTCPSHGSLVKANKGLKVRRGQTAYLQDGDLQFHIPRQKDA
CKVEVVLNEPITQQVGKLMPQVFDCHYLADEVKYVHNGCPLLKKDTVKLRLYRFTDTETH
MEVFSLHVDVVEPDCGIIKLGPKSLEVPEFYGLSDTVDGHVVSFHYERRSSLECSIYLSG
HDTHLPAHGQLVTGEPEKATTRGDEPESFIHLRQQLDNKARAMCKSEDCLKGLKRVKFTK
IPCDDFLVMGLRYQHIDPPSPDVDYIAIRLDLKDTRSGSVYQSEKAWIPVQIVGAMPNQP
PKASFMSMFILEVDQFILTPLSTATLDAEDEETLKQHLVFNVTKPPAAGFIAHLSDHTRP
ISSFTWLDLNGMLIGYQPPNSSHTQRRNYEVEFEVHDFFFEKSPSMTVHISVRNADTNAP
RVSWNMGLSLLEGQSRPITWEQLQIVDNDNLNAVRIITVDGLQHGQLTVRGGKGFTFTVD
DIRAGVVRYHHDDSDSTKDSIVFRITDGPHQTRHKFPVNILPKDDSPPVLITNMLLEVSE
GQVALLRGSTLQASDLDSSDDYILFNITRPPRAGELMKRPTSGLAGYPVSHFLQKDLSQS
VVYYRHLGHEVFDDYFEVVLSDFHDPPNLSEPQVVMVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHVTRQQLHFVDQESPDSELTYTVTTPPFYTGPHSSSPDAGRLFLVDSVPKFTKDA
NAPLLRLFTQDAVNFMKVAYMPPILDIGPHPQYIQFVLSVTNHLGKTVPGICFNITVVPV
DNQPPQVITNPLTVDEGGERWLGPEHLLLSDVDSMEEALQVVLQREPQHGALQLRGLPLN
PGNSFTVQDLKSLKVRYNHDSSETVEDTVEFTATDGTNSGRFVLKVKVIPVNDEVPVLVA
GLKPVLNCAEGRQVVITAEHVYATDADSDDGGLAFLIARQPRRGVVLRNAVVVDSFVQAD
VTAGIVTYKHTGLEIGLTPRHDTITFVISDGPIENLPPCCGEENPSRTRDVTQLHARQSL
PVYDLHITVFPVDSQPPSLTTGDILIVDEGGSAPITVSHLKASDVDTVLDQLVFSLISPP
QFGYIENVLPSPGFEKSNTGISIASFTYKDIIDGHVNYVQSRHQRMEPTADQFMLCVSDG
IHSSAHVPFYIIINPTNDEIPQFVARNITVREGEMKQLDSSVLHAMDLDVPKNSMLFSVV
RAPQHGSIITHNGENPVYRRGEASPPIPVIDFTMTDLSNGMDLMYMHDDSENMEDSFTIQ
LTDGRHQIQRQVMVKVLPVNDEEPRVIRNNGVDVEPGEARLISSVTLFAQDSDTPSSELS
YIFDSVPTQGILQLKEGQDWATLTAGRNCSQEMVDMNLLRYVHTGLHGAKTHDFFVFYLS
DGKNQSPRQHFQISIKDLEKGNIAIFVKPANVSRGDRVVLTTDVLLANDGTEKPEELLYI
ITHPPAHGHIEYIKHPGLGISTFSQMDVAASLVAYVHDNRATTPTETFQFVVSNGKTSRN
GSFEIAVEMVDRLLPSLTSNKGLSVPQGSSVILGPDRLVMSDPDTPPSALTFVLLQPPQY
GRLLLGGGTLTAGSNFTQRDIQDMEVTYEHDGGPSQIDRFAFTASDSTKRGFLLDGQLHT
EPVFFTIQIKPLDKSCPEVVKLLPLWKVEHLGDGRRGIFVSSLELKAQDSDSREEELMFC
IVRPPYFGYLENITTGGFVPQRFSQIELTRRTIAYIINPDMESLSDSLEFTVSDPLGNTG
PSHILEFSWSSVDLSQSEYSVCEDQGAVSVDILRTGNLAESSYVTVQVKEVTATAGKDFL
TSPSSLIQFDPGVAKRSWRSEIIQDHLEEAEETFEVLLVSPQGTVIGSNNKARVTIKDSG
RGQHSRDQDQEAPVLGGKEIRSDAYPQHGSIQLEKLPLGTESVIWTRGDSISRPGADVTK
RKLKVMDNPKSIAPSSVFHNGTDIVYTYHGIMQMQVQDDTSTLRKGRRANIRVVGRGTQQ
QVSTVLTKSKSDPQKKSSKPQKTEPNRGRATADDSIPKPCVPELMGLLHFDQTTNQLLHC
NGVSWRPWAPTDQMVKAQMCPQGWTFHGGHCYTLSTDHKATWSTANKACRERYKGTLASV
LSKADMDWLWDFSRRKPFWIGLNDRDGKGRWEWAGGEPVTYTNWRKTPPRSKRKGNKKCV
LVWRRAKWQIRDCKTGRGHHFVCSV
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacggggtcaaacactggcctggaccttgtttccagtttttctgctgggattg
acttgcccatcacacggttccctcgtaaaagccaacaagggtttaaaagtgagacggggt
cagaccgcctacctccaggacggtgacctgcagttccacattccccgtcagaaggatgca
tgcaaggtggaggtggtcttaaacgagcccataactcaacaagtgggaaagctcatgccc
caggtatttgattgccactatctggcggacgaggtgaagtacgtccataacggctgtcca
ttgttaaagaaggacaccgtcaagcttcgactgtacagattcacggatacggagacacac
atggaggtgttttctctccatgtggacgttgtggaacctgattgcggcatcatcaagctg
gggcccaaatctctggaggttcctgaattctacggtctctctgacaccgtggatggccac
gtggtgtccttccattatgagaggaggtctagtctggagtgcagcatctatctgagtggc
catgacacccaccttccagcccacggccaactggtcaccggagaaccagaaaaagctacc
acaagaggggacgagccagagagcttcatccacctacgccagcagctagataataaagcc
agagcaatgtgtaaatcagaagactgcctgaagggtctgaagcgagtgaagttcaccaaa
attccctgtgatgacttcctggtgatggggctgaggtaccagcacatagaccctccatct
ccagacgtagactacatcgcaatcagactagatctcaaggacaccaggagtggcagcgtc
tatcagtctgaaaaggcctggattccagtgcagatagtgggtgcgatgcccaaccagcct
cccaaagcgtccttcatgtccatgttcatcctggaagtggaccagttcatcctcactccg
ctctccactgccacgctagacgccgaagacgaggaaaccctcaaacagcatttggttttc
aacgtcaccaaaccgcctgcggccggcttcatcgcccatctgtcggatcacacccgcccg
atctcttccttcacgtggctcgatctcaacggcatgctcattgggtatcaacctccgaac
tcctcacacacccaacgcaggaattacgaggtggaatttgaagttcatgattttttcttt
gagaagagcccgtcaatgactgttcacatatctgtaaggaatgcagacacaaatgcaccc
agagtgtcctggaacatgggtctcagtctgttagagggtcagtctaggccaataacgtgg
gagcagctccagattgtggacaacgacaatttaaatgctgtccggatcatcacggtggac
ggcctgcagcacggacagctcaccgtcagagggggaaagggcttcacgttcaccgtcgac
gacatcagagccggcgtggttcgctatcaccacgacgacagcgactccaccaaagactcc
atcgtcttccgcatcaccgacgggccccatcagacccgacacaagttccccgtaaacatc
ctgcccaaggacgacagccctccggtcctcatcaccaacatgctgctggaggtgtccgag
ggacaggtggcgttgctgagaggctccaccctccaggcttcagacctggactccagcgac
gactacatcctcttcaacatcacccgccccccgcgggcaggagagctcatgaaaaggcca
acgtcagggctcgcgggttatccggtcagccactttctgcagaaagacctgtcccagtcc
gtggtttactatcgtcacctaggacacgaggtgtttgatgactactttgaggtggtgctg
tcggatttccacgacccccccaacctgtcggagcctcaagtggtgatggtgcacatagag
cctgttccagaccaaccccccaaagaggttcctggttccagtcggtgtcttgtgatcaaa
gaaacagaagtggtccacgtaacgcggcaacagcttcacttcgtagaccaggagtccccc
gacagtgagcttacgtacacagttaccactccacctttctacactggtcctcacagcagc
agtccagatgctgggaggttgttcctagtcgacagcgtacccaaattcaccaaagacgcc
aacgcaccgctgctgaggctcttcacacaggatgcagtgaacttcatgaaagtagcctac
atgcctccaatcttggacattggccctcacccccagtatatccagtttgttctctctgtt
accaaccacctgggaaaaaccgtccctgggatctgctttaacatcactgtggtgccagtg
gacaaccagccgccacaggtcattaccaaccctctgactgtagacgagggaggggagcgc
tggctcggccctgaacacttgttgctgtcagacgtggactcaatggaagaagccctgcag
gtggtgcttcagagggagccacagcacggagctctgcagctacgtggactcccgttaaat
ccaggcaactctttcaccgtgcaagacctaaaaagccttaaagttaggtacaatcacgac
agctcagaaactgtagaggacaccgttgaattcactgcgactgatggaaccaattcgggc
cgttttgtcctgaaagtgaaggtgattcccgttaacgacgaggtcccagtgttggttgct
ggtttgaaaccggttctcaactgcgcggagggacggcaagtagtcatcacagctgaacac
gtctacgctactgacgcggacagcgacgacggcggcctggcgttcctgatcgctcggcaa
ccgcgtcgcggtgtcgttctccgaaacgccgtcgtggttgacagcttcgtccaggccgac
gtcaccgcggggatcgtcacctacaaacacacaggattggagattggactcactcctcgc
catgacaccatcacctttgtcatttctgatggaccaatagaaaaccttcctccatgctgc
ggtgaagaaaacccctccaggaccagagacgtgacccagctacatgcacgacagagtctg
cctgtgtatgacctccacatcacggtgtttccagttgacagccaaccaccttctctaaca
acaggtgacatacttattgtggatgaaggggggtctgcacctataactgtatctcactta
aaggcctctgacgtggacactgtcctggaccaactggtcttcagtctgatctctccgccc
cagtttggctacattgaaaatgtcctgcctagtcctggatttgagaaaagcaacacgggt
ataagcatagcttcctttacatataaagacatcattgacggtcacgtgaactatgtacag
tccagacaccagaggatggagcccacagctgaccagttcatgctctgtgtgtccgacggc
atacacagctctgcccacgtccccttctacattattattaacccgacgaacgatgagatc
ccacagtttgtggctcgtaacatcacagtacgagaaggagaaatgaagcagctggactcc
tcagttttgcatgcgatggatctggatgtccccaagaacagcatgctcttcagtgtggtc
agagccccacagcatggcagcatcatcacccacaacggtgaaaaccctgtctacaggaga
ggagaagccagtcctccgatccctgtgatcgacttcacaatgacagatctttcaaatgga
atggatctaatgtacatgcacgatgactcagagaatatggaggacagttttaccatccag
ttgactgatggcaggcaccaaatccaaagacaggtgatggttaaagtgctgccagtcaat
gacgaggagcctcgtgtcatcaggaacaatggagtggacgtggagccaggagaagccagg
ctcatttccagcgttacactatttgcacaggacagtgatactccttcttcagagctcagc
tacatatttgatagtgttcctacccaaggaatacttcagcttaaggaaggccaagattgg
gcgacactgacagcggggagaaactgctcccaggagatggtggacatgaaccttctgcgc
tacgtccatacaggcctgcacggtgctaaaacacatgacttctttgtcttctacttgtcg
gatggaaagaatcaatcaccacggcagcacttccagatctctatcaaagatctagaaaaa
ggaaatatcgccatctttgtgaagccggcaaacgtcagccgtggagatcgcgtggttctc
accacagatgtgctgttggccaacgatggcacagaaaaacccgaggagcttctgtacatc
atcacccaccctcctgctcacggacacatagagtacatcaaacatcccggactgggcatc
tccaccttcagccagatggacgtagcagccagccttgtggcttacgtgcatgacaaccga
gccaccacgcccacagaaacctttcagtttgttgtgagtaacggtaaaaccagccgaaat
gggagctttgagattgcagtggaaatggtggatcgcctcctgccgtctctgacctccaac
aaaggcctctccgttccacaaggctcctccgtgatcctgggtcccgaccgcctggtcatg
tccgaccctgacactccacccagcgccctgacctttgtcctcctccagcctccacagtat
ggcaggctgcttttaggtggtggaacactaactgctggctcaaacttcacccagagagac
atccaggacatggaggtaacatatgaacatgacggggggccgtcgcagatcgaccgattt
gcctttacggcctctgacagcaccaaacggggtttcctgctggacgggcagttgcatact
gaacctgtgttcttcactatccagatcaagcctttggataagtcgtgtcctgaggtagtg
aagctgcttcccctttggaaagtggagcatctcggcgatggacgacgcgggatcttcgtg
tcatctctcgagctgaaggcccaagacagtgacagcagagaagaagagctgatgttctgc
atcgttcgccccccctactttggttacctagaaaacattactacaggtgggtttgtaccc
caacgcttctctcagatagagctgaccaggaggaccattgcctacatcatcaacccagac
atggagtccctctcagacagcctggagttcacggtgtcggatcctttagggaacaccggg
ccctctcacatacttgaattcagctggtcctcagtggacctgtctcagtcggagtactct
gtgtgcgaggaccagggagccgtctcagtggacatcctccggacagggaacctggccgag
tcttcgtacgtcactgtccaggtaaaggaggtgactgcaacagctggaaaagactttctt
acgagtccttcttccctcattcagtttgatccaggagtagcaaagagaagctggagaagt
gagatcattcaggatcacctggaggaggcggaggagacgtttgaagtgctgctggtctcc
cctcaaggcacagtgatcggcagcaacaacaaggctcgggtcaccatcaaagactcagga
agaggacagcacagccgggaccaggatcaggaggcccctgttcttggtggaaaagagatt
cgttcagacgcatacccccagcatggatccattcaactagagaaactgcccctcgggacc
gaatctgtaatctggacccgcggagacagcatctctaggccgggagcagatgtcacaaaa
aggaaactcaaagttatggacaacccaaagtctattgcaccttcatccgtttttcacaac
gggacagacattgtttacacgtatcacggcatcatgcaaatgcaagtacaggacgacacc
tccacgttgaggaagggcagaagggcaaacatccgtgtggtcggcaggggaacgcagcag
caggtgtcaacggtgcttactaagtcaaagtcagatcctcaaaaaaagagctcaaaacct
caaaaaactgagccgaatagaggacgcgctacagctgatgactccatacctaagccctgt
gtgccagaactgatgggactcctgcatttcgaccaaactaccaatcagctccttcactgc
aacggcgtctcctggagaccctgggcaccaaccgatcagatggtgaaggcccagatgtgt
cctcagggctggacctttcatggtggccactgttacaccctcagcactgaccacaaggcc
acatggagcacagccaataaggcctgcagggagagatataaaggcacactagcaagcgtt
ctctctaaagccgacatggactggctgtgggacttcagcagaagaaaaccattttggata
gggctgaatgacagggacggcaaaggacgctgggagtgggcgggcggtgagccggtcacc
tacaccaactggagaaagacgcccccccggtccaaaaggaagggaaacaagaagtgcgtc
ctggtgtggagacgggccaagtggcaaatcagggactgcaagacgggtagaggtcatcac
tttgtgtgttcagtgtga
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