Echinicola strongylocentroti: DN752_12345
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Entry
DN752_12345 CDS
T05506
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
est
Echinicola strongylocentroti
Pathway
est00521
Streptomycin biosynthesis
est00523
Polyketide sugar unit biosynthesis
est00541
O-Antigen nucleotide sugar biosynthesis
est01100
Metabolic pathways
est01110
Biosynthesis of secondary metabolites
est01250
Biosynthesis of nucleotide sugars
Module
est_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
est00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DN752_12345 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DN752_12345 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DN752_12345 (rfbC)
Enzymes [BR:
est01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DN752_12345 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AWW30853
UniProt:
A0A2Z4IKF5
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All DBs
Position
3179224..3179775
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AA seq
183 aa
AA seq
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MEIRSTPIQDVFELYPKVFNDARGYFLETYREDLLAEKGINTRWVQDNQSFSIAGTVRGL
HFQHAPHAQAKLVRVVTGKVYDVCVDLRKDSPTFGQSHGVILDSAQHNMLYVPEGFAHGF
SVLEDAVFSYKCSNFYNKASEGGIIWDDKQLDIDWKVGSPILSDKDLALPSLEEFKQQTG
GGL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacgtagcacgcctatccaagatgttttcgaattgtatccgaaagttttcaat
gatgccagagggtattttctggaaacgtaccgggaagatttactggcagaaaagggcatt
aacacccgttgggttcaggacaatcagtcgttttctattgcgggtacagtgagggggctt
cattttcagcatgctcctcatgcccaagctaagctggtaagggtggtcacgggcaaagtt
tatgatgtgtgtgttgatttgagaaaggattctcctacctttgggcaaagtcatggagtg
atcctggacagtgcccagcacaatatgctgtacgtaccggaaggatttgcccatggattt
tctgtgttggaggacgctgtattttcttataagtgctccaatttttataacaaagccagt
gaagggggcattatctgggatgataagcagttggatattgactggaaagtaggatcacct
atcctatcagataaggatttagcgttgccttcattggaagaatttaagcagcaaacagga
ggaggattgtaa
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