Empedobacter stercoris: HNV03_12205
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Entry
HNV03_12205 CDS
T06804
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
este
Empedobacter stercoris
Pathway
este00521
Streptomycin biosynthesis
este00523
Polyketide sugar unit biosynthesis
este00541
O-Antigen nucleotide sugar biosynthesis
este01100
Metabolic pathways
este01110
Biosynthesis of secondary metabolites
este01250
Biosynthesis of nucleotide sugars
Module
este_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
este00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HNV03_12205 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HNV03_12205 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HNV03_12205 (rfbC)
Enzymes [BR:
este01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HNV03_12205 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QNT15351
UniProt:
A0A9Q6V9P8
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All DBs
Position
2541952..2542527
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AA seq
191 aa
AA seq
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MKVTETKLKGCFILEPTVFEDSRGYFFESYNENKIEEILGYKPTFVQDNQSKSSYGVVRG
LHMQAGEHAQAKLVRVVEGAVIDVAVDVRPGSETYGQSVAVELSAENKRQLFIPRGFLHG
FSVISDSATFFYKCDNGYNKESEDGVNPLDQELNIDWQIPSDKMIISEKDQEAQSFGEFK
VKKLTSEGVNK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaacagagacaaaattaaaaggttgttttattttagaaccaactgtttttgaa
gattcgagaggttatttctttgagtcgtataacgaaaataaaatagaagaaattttaggg
tataaaccaacttttgttcaagataatcagtctaaatcttcttacggtgtagttcgtgga
ctacatatgcaagcgggagaacatgcacaagcaaaattagttcgtgtggtagaaggtgct
gtaattgatgttgcagttgatgttcgtccaggttctgaaacctatggtcaatcagttgca
gtagaattatctgctgagaataaacgccaattgtttattccgagaggatttttacatggc
ttttctgtaatatctgattcagctacatttttctataaatgtgacaatgggtataataaa
gagtcagaagacggcgttaaccctttagatcaagaattgaatattgattggcaaatccct
tcggataaaatgattatttctgaaaaagatcaagaagcacaatcgtttggagagtttaag
gtgaagaagttaacaagtgaaggagttaacaagtga
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