Eleftheria terrae: N7L95_24490
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Entry
N7L95_24490 CDS
T09184
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
etb
Eleftheria terrae
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etb03019
]
N7L95_24490 (hrpA)
Enzymes [BR:
etb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
N7L95_24490 (hrpA)
Messenger RNA biogenesis [BR:
etb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N7L95_24490 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
NACHT
AAA_25
AAA_19
SRP54
AAA_30
T2SSE
PhoH
Motif
Other DBs
NCBI-ProteinID:
WKB55250
LinkDB
All DBs
Position
5446765..5450697
Genome browser
AA seq
1310 aa
AA seq
DB search
MPPRSASAREARGSAAPPANPVPPIQFPESLPVSARRDEIARAIEQHQVVIVCGETGSGK
TTQLPKLALAMGRGRGAGGRGLIGHTQPRRIAASSVAKRIAQELNSPLGEHVGFKVRFQD
RLSPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPD
LKIIVTSATIDADRFAQHFASIKGPAPVIMVSGRLYPVEQRWRPFEENRDYDLNNAIADA
VDELWREGRGDVLVFLPGEREIRDAAEHLRRHHPPGVEILPLFARLSQQEQDRVFETGAA
PRIVLATNVAETSLTVPGIRYVIDSGQARVKRYSYRNKVEQLQVEPVSQAAANQRAGRCG
RVSNGICIRLYDEADFAARPPFTDPEILRSSLAGVILRMKSLRLGAVEDFPFIEPPPRRA
IADGYQLLAELNAVDEQNELTPIGLELAKLPLDPRVGRMIIEARERQSLSEVLVIASALS
VQDVRDRPLEHQQAADEKHKKFDDEKSEFMGYLKLWKWLEESRGGPRPAAKGQGQGQGGA
APASDSHKLSSRKYEQLLRDNFVSPRRVREWRDIYSQLHTVVAEHGWRMNTLPATYDQVH
LAMLSGLLGNIGLKSDEDEWYLGARGIKFWRHPGAHLSKKPGRWIIAAELVETTRLFGRG
IAAIQPEWIPGIAGHLLKKQLLEPHWEKKPAEVVALERATLYGLVIYNNRRVNFGQVDPV
AAREMFIREALVNGEWETRLPFLAHNQKLVRQVEELEHKSRRQDVLVDDELIYAFYDQQL
PADVYSGHSFERWWREQSKREPKLLMLTKDELMRHEAAGITTSAFPKTLRLGGVDCATSY
LHDPGDAKDGVTVTVPIYALNQVSEERCEWLVPGMLKDKVLALLKSLHQKPRARLVPLPD
YAEAFIASVPFAQGGLLEALLKAVREKTQLDVKRGDFKLETLQPHLFMNFRVVDEHGRQL
GMGRNLPALKAELGSQARSAFQALAALKLGNAEEAAASPPPVAAASRGGQGARREPAAAA
APAAAPAPSARYTGWTFGELPELMEVRRGAQSLIGFPALIDKGAHVEIEVFDEPEVAAAR
HRAGLRRLVALQLKEPLKYLEKNLPDLQKMAVAFMSLGTAEELRDQIIEVALDRAFLLEP
LPHDEFSFKARLEEGRTRLNLIAQEVSRLAGGVLLEYQATLRKLKDARAPKEVADDIGTQ
LQRLMPKRFISQTPYAQLQHFLRYLKGIQMRLDKLRSDPARDSQRLAELRPLEQRYTRAL
ADRKGAADSRLDEFRWLLEELRISLFAQELRTPQPVSVKRLEKSWSQLVS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgaagcgcgtccgcacgcgaggcgcggggatccgccgccccgcctgccaac
ccggtgccgccgatccagttcccagagtccctgcccgtgtccgcgcggcgcgacgaaatc
gcgcgtgcgatcgagcagcaccaggtggtgatcgtctgcggcgagaccggctcgggcaag
accacccagctgcccaagctcgcgctggccatgggccgcggacgcggcgccggcgggcgc
ggcctgatcggccacacccagccgaggcgcatcgcggcgtccagcgtggccaagcgcatc
gcgcaggagctgaactcgccgctgggcgagcatgtgggcttcaaggtgcggttccaggac
cggctctcgccgggcgcctcggtcaagctgatgaccgacggcatcctgctcgccgagacc
cagaccgatccgctgctcaaggcctacgacacgctgatcatcgacgaggcccacgagcgc
tcgctgaacatcgatttcctgctgggctacctgaagcagctgctgccacgccggccggac
ctgaagatcatcgtcacctcggccaccatcgacgccgaccgtttcgcccagcacttcgcc
agcatcaaggggccggcgccggtcatcatggtctcgggccggctgtatccggtggagcag
cgctggcggccgttcgaggagaaccgcgactacgacctgaacaacgccatcgccgacgcg
gtggacgagctctggcgcgagggccggggcgacgtgctggtgttcctgcccggtgagcgc
gagatccgcgacgcggcggagcacctgcgccgccaccatccgccgggggtggagatcctg
ccgctgttcgcccgcctgagccagcaggagcaggaccgcgtcttcgagaccggcgcggcg
ccccgcatcgtgctggccaccaacgtggccgagacctcgctgacggtgccgggcatccgc
tacgtcatcgacagcggccaggcccgggtcaagcgctacagctaccgcaacaaggtcgag
cagctgcaggtggagccggtcagccaggcggccgccaaccagcgggccgggcgctgcggg
cgggtgtccaacggcatctgcatccgcctctatgacgaggccgacttcgccgcccggccc
ccgttcaccgaccccgagatcctgcgctcgtcgctggccggcgtgatcctgcggatgaag
tcgctgcgcctcggcgcggtcgaggactttcccttcatcgagccgccgccgcggcgcgcc
atcgccgacggctaccagctgctggccgagctgaacgcggtggacgagcagaacgagctg
acgcccatcggcctggagctcgccaagctgccgctggacccgcgggtcgggcgcatgatc
atcgaggcccgcgagcgccagtcgctcagcgaggtgctggtgatcgccagtgcgctcagc
gtgcaggatgtgcgggaccggccgctggagcaccagcaggcggccgatgagaagcacaag
aagtttgacgacgagaagtccgaattcatgggctacctcaagctctggaagtggctggag
gagtcgcgcggcggtccccggccggccgccaaggggcaggggcaggggcagggcggggct
gcgccggccagcgattcgcacaagctctccagccgcaagtacgagcagctgctgcgtgac
aatttcgtctcgccgcgtcgggtgcgggagtggcgcgacatctactcgcagctgcacacc
gtggtggccgagcacggctggcgcatgaacacgctgcccgccacctatgaccaggtgcac
ctggccatgctcagcggcctgctgggcaacatcggcctcaagagtgacgaggacgagtgg
tacctgggcgcgcgcggcatcaagttctggcgtcacccgggcgcccacctctcgaagaag
ccggggcgctggatcatcgccgccgaactggtggagaccacccggctgttcggccgcggc
atcgccgccatccagccggagtggattccgggcatcgccggccacctgctgaagaagcag
ctgctggagccgcactgggagaagaagccggccgaggtggtggcgctcgagcgcgccacg
ctgtatggcttggtcatctacaacaaccggcgcgtcaacttcggccaggtcgacccggtg
gcggcccgcgagatgttcattcgcgaggccctggtcaatggcgagtgggagacccggctg
cccttcctcgcgcacaaccagaagctggtgcgccaggtggaggagctggagcacaagtcg
cgccgccaggacgtgctggtcgacgacgagttgatctacgccttctacgaccagcagctg
cccgccgacgtctacagcggccacagcttcgagcgctggtggcgcgagcagagcaagcgc
gagccgaagctgctgatgctgaccaaggacgagctgatgcggcacgaggcggccggcatc
accacctccgccttcccgaagacgctgcgcctgggcggcgtggactgcgcgacaagctac
ctgcacgaccccggcgacgcgaaggacggtgtcacggtcacggtgcccatctatgcgctc
aaccaggtcagcgaagagcgctgcgaatggctggtgcccggcatgctgaaggacaaggtg
ctggcgctgctcaagagcctgcaccagaagccgcgcgcccgcctggtgcccttgcccgac
tatgccgaggccttcatcgcttccgtgccctttgcgcagggcggcctgctcgaggcgctg
ctgaaggcggtgcgcgaaaagacccaactggacgtcaagcgtggcgacttcaagctcgag
acgctgcagccgcacctgttcatgaatttccgggtggtggatgagcatgggcgccagctc
ggcatgggccgcaacctgccggcgctgaaggccgagctgggcagccaggcccgcagcgcc
ttccaggcgctggccgcactcaagctgggcaacgccgaggaagcggctgcctcgccgccg
ccggtggcggctgcgtcacgcggcgggcagggggcgcggcgcgagccggcggcggcagcg
gcccccgccgccgcaccggcgcccagcgcccgctacaccggctggaccttcggcgagctg
cccgagctgatggaggtgcggcgcggtgcgcagagcctgatcggcttcccggccttgatc
gacaagggcgcccatgtcgagatcgaggtgttcgacgaacccgaggtggccgccgcccgc
caccgcgccgggctgcgccgactggtggccctgcagttgaaggagccgctcaagtacttg
gagaagaacctgcccgacctgcagaagatggcggtggccttcatgagccttggcacggcc
gaggagttgcgcgaccagatcatcgaggtggccctggaccgcgccttcctgctggagccg
ctgccgcatgacgagttcagcttcaaggcccggctggaggagggacgcacccggctcaac
ctgattgcccaggaggtctcgcgcctggcgggcggggtgctgctcgaataccaggcgacg
ctgcgcaagctgaaggacgcgcgcgcgccgaaggaggtggcggacgacattggcacgcaa
ctgcagcggctgatgccgaagcgtttcatatctcagacaccttatgcacagctgcagcat
ttcttgcgttacctgaagggcatccagatgcggctggacaagctgcgcagcgaccccgcg
cgggacagccagcgcctggccgagctgcgaccgctggagcagcgctacacccgggcactg
gccgaccgcaagggcgccgcggacagccggctcgacgaattccgctggttgctggaggaa
ttgcgcatcagcttgtttgcgcaggagctgcgcacgccgcagccggtttcggtcaagcgg
ctggagaagagctggagccagctggtgtcgtga
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