Echinops telfairi (small Madagascar hedgehog): 101641957
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Entry
101641957 CDS
T08707
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101641957 (DDX55)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101641957 (DDX55)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Helicases
101641957 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
101641957
NCBI-ProteinID:
XP_045152659
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPRVLGALRELGFPCMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQINEVLAHFTKPFPQFSQILWIGG
RNPGEDVQRFKAQGGNIIVATPGRLEDMFRRRAEGLDLASCVKSLDVLVLDEADRLLDMG
FEASINTILELLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLDNYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGRALEALVRNVGILCIH
GKMKYKRNKIFMQFRSLPSGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMRLQGHTVDVLPKLQALALADRAVFEK
GMKAFVSHVQAYVKHECNLIFRLKDLDFARLARGFALLKMPKMPELRGKQFPEFVPVDID
TDTIPFKDKSREKQRQKLLEQKSRERVENGGRRKFVKNKAWSKQKAKKEKKKKTSEKRQR
QEVHGLSFWSLEGLLMGENLL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggaggggtcctgggagtcgctgccggtgcctctgcacccgcgggtg
ctgggtgcgttgcgggagctgggcttcccttgcatgacgccggtgcagtctgcgaccatc
cctctgttcatgaaaaacaaagacgtcgccgcagaagcagtcacaggtagtggcaagacc
ctcgcctttgtcattcctatcctggaaattctcctgagaagggaagagaagttaaagaaa
agccaggttggtgccatcatcatcacacccacgcgggagctggcaattcagatcaatgag
gtcctggcgcacttcacgaagcccttcccacagtttagccagatcctctggattggaggc
aggaaccccggagaagatgtgcagcggttcaaggcccaaggcgggaacatcattgtggcc
acgccaggccgcctggaggacatgttccggagaagggccgagggcttggatttggccagc
tgtgtgaaatccctcgacgtcctggtgctggatgaggcggaccgacttctggacatgggg
tttgaggccagtataaacaccatcctggagctcctgccgaagcagaggaggacgggcctc
ttctcggccacacagacgcaagaggtggaaagcctggtgcgcgcaggcctgaggaacccc
gtccgcatctccgtgaaggagaagggggtggcagccagcagcacccagaaaaccccctcc
cgcctggacaactactacatggtgtgtaaggcagacgagaaatttaaccagctggtgcat
tttcttcggaatcataagcaagaaaaacacctggtcttcttcagcacctgcgcctgcgtg
gagtactacgggagggcgctggaggccctggtgaggaacgtggggatcctgtgcattcat
gggaagatgaagtacaagcgcaacaagatcttcatgcagttccgttcgctgccaagtggg
attttggtgtgcaccgacgtgatggcccggggaatcgacatccccgaggtccactgggtt
ttgcagtacgaccctcccagcagtgccagcgccttcgtgcaccgctgtggccgcacggcc
cgcattggccatggcggcagcgccctcgtcttcctgctccccatggaagagtcctacgtc
agcttcctggccattaaccagaagtgccccctgcaggaaatgaggcttcaaggccacacg
gtggacgtcctccccaagctgcaggcgctggccctggctgaccgagccgtgtttgagaag
gggatgaaagccttcgtgtcccatgtccaggcgtacgtgaagcatgagtgtaacctcatc
ttcaggctgaaagatcttgattttgctcgtctggcgcgaggctttgccctgctgaagatg
cccaagatgccagagctgagggggaagcagttccccgagttcgtgcccgtggacattgac
acagacaccatcccctttaaagacaaaagccgagaaaagcagaggcagaagctgctggag
cagaagagcagagagcgagtggagaacggagggaggagaaagttcgtgaagaacaaggct
tggtccaagcagaaggccaagaaggagaagaagaagaaaacgagcgagaaaaggcaaagg
caggaggtacacggcctttcattctggtcactggaaggattactgatgggagagaatctt
ttgtag
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