Echinops telfairi (small Madagascar hedgehog): 101642538
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Entry
101642538 CDS
T08707
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X2
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101642538 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101642538 (VTI1A)
Membrane trafficking [BR:
etf04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
101642538 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
Fusion_gly
MMPL
DUF1664
Mer2
DUF5344
Peptidase_S46
DUF4048
Cir_Bir_Yir
ZnuA
FapA
Motif
Other DBs
NCBI-GeneID:
101642538
NCBI-ProteinID:
XP_004700979
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGTYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRI
LTGMLRRIIQNRILVVILGIIVVITILMAILFSFRRH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgatttcgaaggctacgagcaggacttcgcggtgcttactgcggagatcacc
agcaagatcgcgagggtcccccggctccctcccgatgagaagaaacagatggttgccaac
gtggagaagcagcttgaagaagcaaaagaattgctggagcagatggatttggaagtccgg
gagataccaccccaaagtcgcggaacgtacagcaacagaatgagaagctataagcaagaa
atgggaaaacttgaaacagattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcggagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatctcggagactagaggctgggtaccaaatagcagtg
gagaccgagcaaatcggccaggagatgctggaaaacctcagtcatgatagagaaaagata
cagcgagcacgggaaagactccgggaaacagatgctaacttgggaaagagctccaggatt
ctgacagggatgttgcgaagaatcatccagaaccgcatcctggttgtcatcctgggaatc
attgtggtcatcaccatcctgatggcgatcctcttctctttcagaagacactga
DBGET
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